IllnessAnorectal malformations, [non-]syndromic; differential diagnosis
Summary
Short information
Comprehensive differential diagnostic panel for anorectal malformations comprising 11 core candidate genes and altogether 23 curated genes according to the clinical signs
ID
AP3339
Number of genes
15
Accredited laboratory test
Examined sequence length
27,5 kb (Core-/Core-canditate-Genes)
42,8 kb (Extended panel: incl. additional genes)
42,8 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Test material
- EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications
NGS +
[Sanger]
Gene panel
Selected genes
Name | Exon Length (bp) | OMIM-G | Referenz-Seq. | Heredity |
---|---|---|---|---|
CCNQ | 685 | NM_001130997.3 | XL | |
CDX1 | 798 | NM_001804.3 | AD | |
FANCB | 2580 | NM_001018113.3 | XLR | |
FOXF1 | 1140 | NM_001451.3 | AD | |
GLI3 | 4743 | NM_000168.6 | AD | |
MED12 | 6534 | NM_005120.3 | XL | |
MID1 | 2004 | NM_000381.4 | XLR | |
RECQL4 | 3628 | NM_004260.4 | AR | |
SALL1 | 3975 | NM_002968.3 | AD | |
ZIC3 | 1404 | NM_003413.4 | XLR | |
CASK | 2766 | NM_003688.3 | XLR | |
CDX2 | 942 | NM_001265.6 | AR | |
KDM6A | 4206 | NM_021140.4 | XL | |
MYCN | 1395 | NM_005378.6 | AD | |
MYH14 | 5988 | NM_024729.4 | AD |
Informations about the disease
Clinical Comment
Anorectal malformations comprise a broad spectrum, ranging from mild anal anomalies to complex cloacal malformations - 60% occur in the context of defined genetic syndromes or complex multiple congenital anomalies or in association with chromosomal aberrations; remaining 40% are isolated
Synonyms
- Alias: Anal atresia
- Alias: Non-syndromic familial congenital anorectal malformations
- Allelic: Alveolar capillary dysplasia with misalignment of pulmonary veins (FOXF1)
- Allelic: Baller-Gerold syndrome [craniosynostosis, radial aplasia] (RECQL4)
- Allelic: Congenital heart defects, nonsyndromic, 1, XL (ZIC3)
- Allelic: Deafness, AD 4A (MYH14)
- Allelic: Fanconi anemia, complementation group B (FANCB)
- Allelic: Greig cephalopolysyndactyly syndrome (GLI3)
- Allelic: Heterotaxy, visceral, 1, XL (ZIC3)
- Allelic: Hypothalamic hamartomas, somatic (GLI3)
- Allelic: Lujan-Fryns syndrome [mental retardation, XL; marfanoid habitus] (MED12)
- Allelic: Mental retardation + microcephaly with pontine +cerebellar hypoplasia (CASK)
- Allelic: Mental retardation, with/-out nystagmus (CASK)
- Allelic: Ohdo syndrome, XL [blepharophimosis, mental retardation] (MED12)
- Allelic: Pallister-Hall syndrome (GLI3)
- Allelic: Peripheral neuropathy, myopathy, hoarseness + hearing loss (MYH14)
- Allelic: Polydactyly, postaxial, types A1 + B (GLI3)
- Allelic: Polydactyly, preaxial, type IV (GLI3)
- Allelic: RAPADILINO syndrome [radial + patellar aplasia/hypoplasia] (RECQL4)
- Allelic: Rhabdoid tumor predisposition syndrome 2 (SMARCA4)
- Allelic: Rothmund-Thomson syndrome, type 2 [poikiloderma, cong. bone defects, osteosarc.] (RECQL4)
- Anorectal malformation (CASK, CDX1, CDX2, FANCB, FOXF1, GLI3, MED12, MNX1, MYCN, MYH14, ZIC3)
- Bardet-Biedl syndrome 1 (BBS1)
- Coffin-Siris syndrome 4 (SMARCA4)
- Currarino syndrome (MNX1)
- Currarino syndrome [part. sacral agenesis, presacral mass, anorectal malformation] (MNX1)
- FG syndrome 4 (CASK)
- Fanconi anemia, complementation group C (FANCC)
- Feingold syndrome 1 (MYCN)
- Helsmoortel-van der Aa syndrome (ADNP)
- Intellectual developmental disorder, AD 70 (SETD2)
- Kabuki syndrome 2 (KDM6A)
- Luscan-Lumish syndrome (SETD2)
- Menke-Hennekam syndrome 1 (CREBBP)
- Menke-Hennekam syndrome 2 (EP300)
- Opitz GBBB syndrome, type I [hypertelorism, esophageal abnormality, hypospadias] (MID1)
- Opitz-Kaveggia [FG] syndrome [ment. retard., macrocephal, imperfor. anus, corp. call. agen.] (MED12)
- Pallister-Hall syndrome (GLI3)
- Persistent cloaca (CDX2)
- Rabin-Pappas syndrome (SETD2)
- Rubinstein-Taybi syndrome 1 (CREBBP)
- Rubinstein-Taybi syndrome 2 (EP300)
- STAR syndrome: toe Syndactyly, Telecanthus, Anogenital + Renal malformations (CCNQ syn. FAM58A)
- Townes-Brocks branchiootorenal-like syndrome (SALL1)
- Townes-Brocks syndrome 1 (SALL1)
- VACTERL association with hydrocephalus (FANCB)
- VACTERL association, XL (ZIC3)
- VATER/VACTERL, Alveolar capillary dysplasia with misalignment of pulmonary veins (FOXF1)
Heredity, heredity patterns etc.
- AD
- AR
- XL
- XLR
OMIM-Ps
- Multiple OMIM-Ps
ICD10 Code
Bioinformatics and clinical interpretation
No text defined