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Interdisciplinary CompetenceMolecular Diagnostics
Know how in the analysis of genetic material.
For the benefit of patients.

IllnessBone marrow dysfunction, hereditary; differential diagnosis

Summary

Short information

Comprehensive differential diagnostic panel for inherited bone marrow dysfunction comprising 12 or altogether 121 curated genes according to the clinical signs

ID
KP4958
Number of loci
Loci typeCount
Gen80
Accredited laboratory test
Examined sequence length
24,0 kb (Core-/Core-canditate-Genes)
171,6 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Test material
  • EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications

NGS +

[Sanger]

 

Loci panel

Gen

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
BRCA210257NM_000059.4AR
BRIP13750NM_032043.3AR
DKC11545NM_001363.5XLR
ELANE804NM_001972.4AD
GFI11269NM_005263.5AD
HAX1840NM_006118.4AR
PALB23561NM_024675.4AR
RPL35A333NM_000996.4AD
RPS19438NM_001022.4AD
RPS24393NM_033022.4AD
SBDS753NM_016038.4AR
ABCB72259NM_004299.6XLR
ATM9171NM_000051.4AR
BRCA15592NM_007294.4AR
CBL2721NM_005188.4AD
CD59387NM_000611.6AR
CEBPA1077NM_004364.5AD
CSF3R2511NM_000760.4AD, AR
CTC13654NM_025099.6AR
CXCR41059NM_003467.3AD
DNAJC212049NM_001012339.3AR
EFL13382NM_001040610.3AR
ERCC42751NM_005236.3AR
ERCC6L22106NM_001010895.4AR
FANCA4368NM_000135.4AR
FANCB2580NM_001018113.3XL
FANCC1677NM_000136.3AR
FANCE1611NM_021922.3AR
FANCF1125NM_022725.4AR
FANCG1869NM_004629.2AR
FANCI3987NM_001113378.2AR
FANCL1128NM_018062.4AR
FANCM6147NM_020937.4AR
FLT32982NM_004119.3AD, SMu
G6PC31041NM_138387.4AR
GATA11242NM_002049.4XLR
GATA21443NM_032638.5AD
GLRX5474NM_016417.3AR
HBA1429NM_000558.5AD, AR
HBA2429NM_000517.6AD, AR
HBB444NM_000518.5AD, AR
MLH12271NM_000249.4AR
MPL1908NM_005373.3AR
MSH22805NM_000251.3AR
MSH64083NM_000179.3AR
NBN2265NM_002485.5AR, Sus
NF18457NM_001042492.3AD
NHP2273NM_001034833.2AR
NOP10195NM_018648.4AR
PARN1920NM_002582.4AD, AR
PMS22589NM_000535.7AR
PRF11668NM_001083116.3AR
PTPN111782NM_002834.5AD
RAD51C1131NM_058216.3AR
RAP1B555NM_015646.6AD
RMRP300NR_003051.3AR
RPL11537NM_000975.5AD
RPL5894NM_000969.5AD
RPS17408NM_001021.6AD
RPS26348NM_001029.5AD
RPS29204NM_001030001.4AD
RPS7585NM_001011.4AD
RTEL13732NM_032957.5AD, AR
SAMD94770NM_001193307.2AD
SAMD9L4756NM_152703.5AD
SLC2A11479
  • No OMIM-Gs linked
NM_006516.4AD
SLC4A12736NM_000342.4AD
SLX45505NM_032444.4AR
STN11221NM_024928.5AD
TAFAZZIN879NM_000116.5XLR
TCN21284NM_000355.4AR
TERT3399NM_198253.3AR, AD
TINF21356NM_001099274.3AD
TP531182NM_000546.6AD
VPS451617NM_007259.5AR
WAS1509NM_000377.3XLR
WIPF11512NM_001077269.1AR
WRAP531647NM_001143990.2AR
XK1335NM_021083.4XL
XRCC2843NM_005431.2AR

Informations about the disease

Clinical Comment

Triphasic, at 2-5 years (inherited most common), between 20-25 years, after 65 years (acquired causes); inherited 10%-15%, 30% pediatric -> 65/1 000 000 live births/y.

 

Synonyms
  • Alias: Bone marrow failure syndromes, inherited
  • Allelic: AIDS, rapid progression to (IFNG)
  • Allelic: Breast-ovarian cancer, familial, 1 (BRCA1)
  • Allelic: Cartilage-hair hypoplasia (RMRP)
  • Allelic: Dyskeratosis congenita, AD 2 (TERT)
  • Allelic: Dyskeratosis congenita, AD 4 (RTEL1)
  • Allelic: Dyskeratosis congenita, AR 4 (TERT)
  • Allelic: Dyskeratosis congenita, AR 5 (RTEL1)
  • Allelic: Emberger syndrome (GATA2)
  • Allelic: Hepatitis C virus, response to therapy of (IFNG)
  • Allelic: Immunodeficiency 21 (GATA2)
  • Allelic: Immunodeficiency 69, mycobacteriosis (IFNG)
  • Allelic: Juvenile myelomonocytic leukemia (CBL)
  • Allelic: Leukemia, acute lymphoblastic (NBN)
  • Allelic: Leukemia, acute myeloid (TERT)
  • Allelic: Leukemia, acute myeloid, susceptibility to (GATA2)
  • Allelic: Leukemia, megakaryoblastic, with/-out Down syndrome, somatic (GATA1)
  • Allelic: Melanoma, cutaneous malignant, 9 (TERT)
  • Allelic: Metaphyseal dysplasia without hypotrichosis (RMRP)
  • Allelic: Monosomy 7 myelodysplasia + leukemia syndrome 2 (SAMD9)
  • Allelic: Myocardial infarction, susceptibility to (GCLC)
  • Allelic: Neural tube defects, folate-sensitive, susceptibility to (MTR)
  • Allelic: Neural tube defects, folate-sensitive, susceptibility to (MTRR)
  • Allelic: Neurodevelopmental disorder with visual defects + brain anomalies (HK1)
  • Allelic: Neuropathy, hereditary motor + sensory, Russe type (HK1)
  • Allelic: Nijmegen breakage syndrome (NBN)
  • Allelic: Noonan syndrome-like disorder with or without juvenile myelomonocytic leukemia (CBL)
  • Allelic: Pancreatic cancer, susceptibility to, 4 (BRCA1)
  • Allelic: Proteinuria, chronic benign (CUBN)
  • Allelic: Resistance to malaria due to G6PD deficiency (G6PD)
  • Allelic: Retinitis pigmentosa 79 (HK1)
  • Allelic: TSC2 angiomyolipomas, renal, modifier of (IFNG)
  • Allelic: Thrombocythemia 2 (MPL)
  • Allelic: Thrombocytopenia with beta-thalassemia, XL (GATA1)
  • Allelic: Thrombocytopenia, XL (WAS)
  • Allelic: Thrombocytopenia, XL, intermittent (WAS)
  • Allelic: Thrombocytopenia, XL, with /-out dyserythropoietic anemia (GATA1)
  • Allelic: Thrombocytopenia, congenital amegakaryocytic (MPL)
  • Allelic: Tuberculosis, protection against (IFNG)
  • Allelic: Tumoral calcinosis, familial, normophosphatemic (SAMD9)
  • Allelic: Wilms tumor (BRCA2)
  • Allelic: Wiskott-Aldrich syndrome (WAS)
  • Allelic: XFE progeroid syndrome (ERCC4)
  • Allelic: Xeroderma pigmentosum, group F (ERCC4)
  • Allelic: Xeroderma pigmentosum, type F/Cockayne syndrome (ERCC4)
  • Acute myeloid leukaemia [panelapp] (NPM1)
  • Adenosine triphosphate, elevated, of erythrocytes (PKLR)
  • Allelic: Cowden syndrome 7 (SEC23B
  • Allelic: Distal renal tubular acidosis 1 (SLC4A1)
  • Allelic: Dystonia 9 (SLC2A1)
  • Allelic: Epilepsy, idiopathic generalized, susceptibility to, 12 (SLC2A1)
  • Allelic: Lymphatic malformation 6 (PIEZO1)
  • Allelic: Stomatin-deficient cryohydrocytosis with neurologic defects (SLC2A1)
  • Alpha-thalassemia/mental retardation syndrome (ATRX)
  • Anauxetic dysplasia 1 (RMRP)
  • Anemia, XL, with/-out neutropenia and/or platelet abnormalities (GATA1)
  • Anemia, hemolytic, Rh-null, regulator type (RHAG)
  • Anemia, hemolytic, due to UMPH1 deficiency (NT5C3A)
  • Anemia, hypochromic microcytic, with iron overload 1 (SLC11A2)
  • Anemia, neonatal hemolytic, fatal or near-fatal (SPTB)
  • Anemia, sideroblastic, 1 (ALAS2)
  • Anemia, sideroblastic, 2, pyridoxine-refractory (SLC25A38)
  • Anemia, sideroblastic, with ataxia (ABCB7)
  • Aplastic anemia (IFNG; NBN, PRF1, SBDS)
  • Aplastic anemia, susceptibility to (SBDS)
  • Ataxia-pancytopenia syndrome (SAMD9L)
  • Atransferrinemia (TF)
  • Bone marrow failure syndrome 2 (ERCC6L2)
  • Bone marrow failure syndrome 3 (DNAJC21)
  • Congenital dyserythropoietic anemia type III [panelapp] (KIF23)
  • Cryohydrocytosis (SLC4A1)
  • Dehydrated hereditary stomatocytosis with/-out pseudohyperkalemia +/- perinatal edema (PIEZO1)
  • Diamond-Blackfan anemia 1 (RPS19)
  • Diamond-Blackfan anemia 10 (RPS26)
  • Diamond-Blackfan anemia 13 (RPS29)
  • Diamond-Blackfan anemia 4 (RPS17)
  • Diamond-Blackfan anemia 5 (RPL35A)
  • Diamond-Blackfan anemia 6 (RPL5)
  • Diamond-Blackfan anemia 7 (RPL11)
  • Diamond-Blackfan anemia 8 (RPS7)
  • Diamond-Blackfan anemia 9 (RPS10)
  • Diamond-blackfan anemia 3 (RPS24)
  • Distal renal tubular acidosis 4 with hemolytic anemia (SLC4A1)
  • Dyserythropoietic anemia, congenital, type II (SEC23B)
  • Dyserythropoietic anemia, congenital, type Ia (CDAN1)
  • Dyserythropoietic anemia, congenital, type Ib (C15orf41 syn. CDIN1)
  • Dyskeratosis congenita, AD 3 (TINF2)
  • Dyskeratosis congenita, AR 2 (NHP2)
  • Dyskeratosis congenita, AR 3 (WRAP53)
  • Dyskeratosis congenita, XL (DKC1)
  • Elliptocytosis-1 (EPB41)
  • Elliptocytosis-2 (SPTA1)
  • Elliptocytosis-3 (SPTB)
  • Exocrine pancreatic insufficiency, dyserythropoietic anemia + calvarial hyperostosis (COX4I2)
  • Familial MDS; Myelodysplastic syndromes (CEBPA)
  • Fanconi anemia, complementation group A (FANCA)
  • Fanconi anemia, complementation group B (FANCB)
  • Fanconi anemia, complementation group C (FANCC)
  • Fanconi anemia, complementation group D1 (BRCA2)
  • Fanconi anemia, complementation group D2 (FANCD2)
  • Fanconi anemia, complementation group E (FANCE)
  • Fanconi anemia, complementation group F (FANCF)
  • Fanconi anemia, complementation group G (FANCG)
  • Fanconi anemia, complementation group I (FANCI)
  • Fanconi anemia, complementation group J (BRIP)
  • Fanconi anemia, complementation group L (FANCL)
  • Fanconi anemia, complementation group N (PALB2)
  • Fanconi anemia, complementation group O (RAD51C)
  • Fanconi anemia, complementation group P (SLX4)
  • Fanconi anemia, complementation group Q (ERCC4)
  • Fanconi anemia, complementation group S (BRCA1)
  • Fanconi anemia, complementation group T (UBE2T)
  • GLUT1 deficiency syndrome 1, infantile onset, severe (SLC2A1)
  • GLUT1 deficiency syndrome 2, childhood onset (SLC2A1)
  • Glycogen storage disease VII (PFKM)
  • Glycogen storage disease XII (ALDOA)
  • Hemolytic anemia due to adenylate kinase deficiency (AK1)
  • Hemolytic anemia due to gamma-glutamylcysteine synthetase deficiency (GCLC)
  • Hemolytic anemia due to hexokinase deficiency (HK1)
  • Hemolytic anemia due to triosephosphate isomerase deficiency (TPI1)
  • Hemolytic anemia, CD59-mediated, with/-out immune-mediated polyneuropathy (CD59)
  • Hemolytic anemia, G6PD deficient; favism (G6PD)
  • Homocystinuria-megaloblastic anemia, cbl E type (MTRR)
  • Homocystinuria-megaloblastic anemia, cblG complementation type (MTR)
  • Imerslund-Grasbeck syndrome 1 (CUBN)
  • Imerslund-Grasbeck syndrome 2 (AMN)
  • Immunodeficiency 52 (LAT)
  • Immunodeficiency, common variable, 13 (IKZF1)
  • Iron-refractory iron deficiency anemia (TMPRSS6)
  • MIRAGE s. [myelodyspl., infection, growth restr., adr. hypoplasia, genit. abn., enteropathy] (SAMD9)
  • Majeed syndrome (LPIN2)
  • Megaloblastic anemia due to dihydrofolate reductase deficiency (DHFR)
  • Mental retardation-hypotonic facies syndrome, XL (ATRX)
  • Monosomy 7 myelodysplasia and leukemia syndrome 1 (SAMD9L)
  • Myelodysplastic syndrome (MDS), Paediatric (CBL)
  • Myelodysplastic syndrome (MDS), Paediatric (FLT3)
  • Myelodysplastic syndrome, susceptibility to (GATA2)
  • Myelofibrosis with myeloid metaplasia, somatic (MPL)
  • Myelokathexis, isolated (CXCR4)
  • Myopathy, lactic acidosis + sideroblastic anemia 1 (PUS1)
  • Myopathy, lactic acidosis + sideroblastic anemia 2 (YARS2)
  • Neutropenia, cyclic (ELANE)
  • Neutropenia, nonimmune chronic idiopathic, of adults (GFI1)
  • Neutropenia, severe congenital 1, AD (ELANE)
  • Neutropenia, severe congenital 2, AD (GFI1)
  • Neutropenia, severe congenital 3, AR (HAX1)
  • Neutropenia, severe congenital 5, AR (VPS45)
  • Neutropenia, severe congenital 7, AR (CSF3R)
  • Neutropenia, severe congenital, XL (WAS)
  • Noonan syndrome-like disorder with/-out juvenile myelomonocytic leukemia (CBL)
  • Ovalocytosis, SA type (SLC4A1)
  • Overhydrated hereditary stomatocytosis (RHAG)
  • Porphyria, congenital erythropoietic (UROS)
  • Protoporphyria, erythropoietic, XL (ALAS2)
  • Pulmonary fibrosis and/or bone marrow failure, telomere-related, 1 (TERT)
  • Pulmonary fibrosis and/or bone marrow failure, telomere-related, 3 (RTEL)
  • Pyropoikilocytosis (SPTA1)
  • Pyruvate kinase deficiency (PKLR)
  • Radioulnar synostosis with amegakaryocytic thrombocytopenia 1 (HOXA11)
  • Revesz syndrome (TINF2)
  • Shwachman-Diamond syndrome (SBDS)
  • Shwachman-Diamond syndrome 2 (EFL1)
  • Sneddon syndrome (ADA2)
  • Spherocytosis, type 1 (ANK1)
  • Spherocytosis, type 2 (SPTB)
  • Spherocytosis, type 3 (SPTA1)
  • Spherocytosis, type 4 (SLC4A1)
  • Spherocytosis, type 5 (EPB42)
  • Syndromic intellectual disability; cytopenia [panelapp] (RAP1B)
  • Thiamine-responsive megaloblastic anemia syndrome (SLC19A2)
  • Thrombotic thrombocytopenic purpura, hereditary (ADAMTS13)
  • Transcobalamin II deficiency (TCN2)
  • Vasculitis, autoinflammation, immunodeficiency + hematologic defects syndrome (ADA2)
  • WHIM syndrome (CXCR4)
  • [Blood groups Diego, Froese, Swann, Waldner, Wright (SLC4A1)
  • [Malaria, resistance to (SLC4A1)
Heredity, heredity patterns etc.
  • AD
  • AR
  • SMu
  • Sus
  • XL
  • XLR
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

No text defined