IllnessBone marrow dysfunction, hereditary; differential diagnosis
Summary
Short information
Comprehensive differential diagnostic panel for inherited bone marrow dysfunction comprising 12 or altogether 121 curated genes according to the clinical signs
ID
KP4958
Number of loci
Loci type | Count |
---|---|
Gen | 80 |
Examined sequence length
24,0 kb (Core-/Core-canditate-Genes)
171,6 kb (Extended panel: incl. additional genes)
171,6 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Test material
- EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications
NGS +
[Sanger]
Loci panel
Gen
Name | Exon Length (bp) | OMIM-G | Referenz-Seq. | Heredity |
---|---|---|---|---|
BRCA2 | 10257 | NM_000059.4 | AR | |
BRIP1 | 3750 | NM_032043.3 | AR | |
DKC1 | 1545 | NM_001363.5 | XLR | |
ELANE | 804 | NM_001972.4 | AD | |
GFI1 | 1269 | NM_005263.5 | AD | |
HAX1 | 840 | NM_006118.4 | AR | |
PALB2 | 3561 | NM_024675.4 | AR | |
RPL35A | 333 | NM_000996.4 | AD | |
RPS19 | 438 | NM_001022.4 | AD | |
RPS24 | 393 | NM_033022.4 | AD | |
SBDS | 753 | NM_016038.4 | AR | |
ABCB7 | 2259 | NM_004299.6 | XLR | |
ATM | 9171 | NM_000051.4 | AR | |
BRCA1 | 5592 | NM_007294.4 | AR | |
CBL | 2721 | NM_005188.4 | AD | |
CD59 | 387 | NM_000611.6 | AR | |
CEBPA | 1077 | NM_004364.5 | AD | |
CSF3R | 2511 | NM_000760.4 | AD, AR | |
CTC1 | 3654 | NM_025099.6 | AR | |
CXCR4 | 1059 | NM_003467.3 | AD | |
DNAJC21 | 2049 | NM_001012339.3 | AR | |
EFL1 | 3382 | NM_001040610.3 | AR | |
ERCC4 | 2751 | NM_005236.3 | AR | |
ERCC6L2 | 2106 | NM_001010895.4 | AR | |
FANCA | 4368 | NM_000135.4 | AR | |
FANCB | 2580 | NM_001018113.3 | XL | |
FANCC | 1677 | NM_000136.3 | AR | |
FANCE | 1611 | NM_021922.3 | AR | |
FANCF | 1125 | NM_022725.4 | AR | |
FANCG | 1869 | NM_004629.2 | AR | |
FANCI | 3987 | NM_001113378.2 | AR | |
FANCL | 1128 | NM_018062.4 | AR | |
FANCM | 6147 | NM_020937.4 | AR | |
FLT3 | 2982 | NM_004119.3 | AD, SMu | |
G6PC3 | 1041 | NM_138387.4 | AR | |
GATA1 | 1242 | NM_002049.4 | XLR | |
GATA2 | 1443 | NM_032638.5 | AD | |
GLRX5 | 474 | NM_016417.3 | AR | |
HBA1 | 429 | NM_000558.5 | AD, AR | |
HBA2 | 429 | NM_000517.6 | AD, AR | |
HBB | 444 | NM_000518.5 | AD, AR | |
MLH1 | 2271 | NM_000249.4 | AR | |
MPL | 1908 | NM_005373.3 | AR | |
MSH2 | 2805 | NM_000251.3 | AR | |
MSH6 | 4083 | NM_000179.3 | AR | |
NBN | 2265 | NM_002485.5 | AR, Sus | |
NF1 | 8457 | NM_001042492.3 | AD | |
NHP2 | 273 | NM_001034833.2 | AR | |
NOP10 | 195 | NM_018648.4 | AR | |
PARN | 1920 | NM_002582.4 | AD, AR | |
PMS2 | 2589 | NM_000535.7 | AR | |
PRF1 | 1668 | NM_001083116.3 | AR | |
PTPN11 | 1782 | NM_002834.5 | AD | |
RAD51C | 1131 | NM_058216.3 | AR | |
RAP1B | 555 | NM_015646.6 | AD | |
RMRP | 300 | NR_003051.3 | AR | |
RPL11 | 537 | NM_000975.5 | AD | |
RPL5 | 894 | NM_000969.5 | AD | |
RPS17 | 408 | NM_001021.6 | AD | |
RPS26 | 348 | NM_001029.5 | AD | |
RPS29 | 204 | NM_001030001.4 | AD | |
RPS7 | 585 | NM_001011.4 | AD | |
RTEL1 | 3732 | NM_032957.5 | AD, AR | |
SAMD9 | 4770 | NM_001193307.2 | AD | |
SAMD9L | 4756 | NM_152703.5 | AD | |
SLC2A1 | 1479 |
| NM_006516.4 | AD |
SLC4A1 | 2736 | NM_000342.4 | AD | |
SLX4 | 5505 | NM_032444.4 | AR | |
STN1 | 1221 | NM_024928.5 | AD | |
TAFAZZIN | 879 | NM_000116.5 | XLR | |
TCN2 | 1284 | NM_000355.4 | AR | |
TERT | 3399 | NM_198253.3 | AR, AD | |
TINF2 | 1356 | NM_001099274.3 | AD | |
TP53 | 1182 | NM_000546.6 | AD | |
VPS45 | 1617 | NM_007259.5 | AR | |
WAS | 1509 | NM_000377.3 | XLR | |
WIPF1 | 1512 | NM_001077269.1 | AR | |
WRAP53 | 1647 | NM_001143990.2 | AR | |
XK | 1335 | NM_021083.4 | XL | |
XRCC2 | 843 | NM_005431.2 | AR |
Informations about the disease
Clinical Comment
Triphasic, at 2-5 years (inherited most common), between 20-25 years, after 65 years (acquired causes); inherited 10%-15%, 30% pediatric -> 65/1 000 000 live births/y.
Synonyms
- Alias: Bone marrow failure syndromes, inherited
- Allelic: AIDS, rapid progression to (IFNG)
- Allelic: Breast-ovarian cancer, familial, 1 (BRCA1)
- Allelic: Cartilage-hair hypoplasia (RMRP)
- Allelic: Dyskeratosis congenita, AD 2 (TERT)
- Allelic: Dyskeratosis congenita, AD 4 (RTEL1)
- Allelic: Dyskeratosis congenita, AR 4 (TERT)
- Allelic: Dyskeratosis congenita, AR 5 (RTEL1)
- Allelic: Emberger syndrome (GATA2)
- Allelic: Hepatitis C virus, response to therapy of (IFNG)
- Allelic: Immunodeficiency 21 (GATA2)
- Allelic: Immunodeficiency 69, mycobacteriosis (IFNG)
- Allelic: Juvenile myelomonocytic leukemia (CBL)
- Allelic: Leukemia, acute lymphoblastic (NBN)
- Allelic: Leukemia, acute myeloid (TERT)
- Allelic: Leukemia, acute myeloid, susceptibility to (GATA2)
- Allelic: Leukemia, megakaryoblastic, with/-out Down syndrome, somatic (GATA1)
- Allelic: Melanoma, cutaneous malignant, 9 (TERT)
- Allelic: Metaphyseal dysplasia without hypotrichosis (RMRP)
- Allelic: Monosomy 7 myelodysplasia + leukemia syndrome 2 (SAMD9)
- Allelic: Myocardial infarction, susceptibility to (GCLC)
- Allelic: Neural tube defects, folate-sensitive, susceptibility to (MTR)
- Allelic: Neural tube defects, folate-sensitive, susceptibility to (MTRR)
- Allelic: Neurodevelopmental disorder with visual defects + brain anomalies (HK1)
- Allelic: Neuropathy, hereditary motor + sensory, Russe type (HK1)
- Allelic: Nijmegen breakage syndrome (NBN)
- Allelic: Noonan syndrome-like disorder with or without juvenile myelomonocytic leukemia (CBL)
- Allelic: Pancreatic cancer, susceptibility to, 4 (BRCA1)
- Allelic: Proteinuria, chronic benign (CUBN)
- Allelic: Resistance to malaria due to G6PD deficiency (G6PD)
- Allelic: Retinitis pigmentosa 79 (HK1)
- Allelic: TSC2 angiomyolipomas, renal, modifier of (IFNG)
- Allelic: Thrombocythemia 2 (MPL)
- Allelic: Thrombocytopenia with beta-thalassemia, XL (GATA1)
- Allelic: Thrombocytopenia, XL (WAS)
- Allelic: Thrombocytopenia, XL, intermittent (WAS)
- Allelic: Thrombocytopenia, XL, with /-out dyserythropoietic anemia (GATA1)
- Allelic: Thrombocytopenia, congenital amegakaryocytic (MPL)
- Allelic: Tuberculosis, protection against (IFNG)
- Allelic: Tumoral calcinosis, familial, normophosphatemic (SAMD9)
- Allelic: Wilms tumor (BRCA2)
- Allelic: Wiskott-Aldrich syndrome (WAS)
- Allelic: XFE progeroid syndrome (ERCC4)
- Allelic: Xeroderma pigmentosum, group F (ERCC4)
- Allelic: Xeroderma pigmentosum, type F/Cockayne syndrome (ERCC4)
- Acute myeloid leukaemia [panelapp] (NPM1)
- Adenosine triphosphate, elevated, of erythrocytes (PKLR)
- Allelic: Cowden syndrome 7 (SEC23B
- Allelic: Distal renal tubular acidosis 1 (SLC4A1)
- Allelic: Dystonia 9 (SLC2A1)
- Allelic: Epilepsy, idiopathic generalized, susceptibility to, 12 (SLC2A1)
- Allelic: Lymphatic malformation 6 (PIEZO1)
- Allelic: Stomatin-deficient cryohydrocytosis with neurologic defects (SLC2A1)
- Alpha-thalassemia/mental retardation syndrome (ATRX)
- Anauxetic dysplasia 1 (RMRP)
- Anemia, XL, with/-out neutropenia and/or platelet abnormalities (GATA1)
- Anemia, hemolytic, Rh-null, regulator type (RHAG)
- Anemia, hemolytic, due to UMPH1 deficiency (NT5C3A)
- Anemia, hypochromic microcytic, with iron overload 1 (SLC11A2)
- Anemia, neonatal hemolytic, fatal or near-fatal (SPTB)
- Anemia, sideroblastic, 1 (ALAS2)
- Anemia, sideroblastic, 2, pyridoxine-refractory (SLC25A38)
- Anemia, sideroblastic, with ataxia (ABCB7)
- Aplastic anemia (IFNG; NBN, PRF1, SBDS)
- Aplastic anemia, susceptibility to (SBDS)
- Ataxia-pancytopenia syndrome (SAMD9L)
- Atransferrinemia (TF)
- Bone marrow failure syndrome 2 (ERCC6L2)
- Bone marrow failure syndrome 3 (DNAJC21)
- Congenital dyserythropoietic anemia type III [panelapp] (KIF23)
- Cryohydrocytosis (SLC4A1)
- Dehydrated hereditary stomatocytosis with/-out pseudohyperkalemia +/- perinatal edema (PIEZO1)
- Diamond-Blackfan anemia 1 (RPS19)
- Diamond-Blackfan anemia 10 (RPS26)
- Diamond-Blackfan anemia 13 (RPS29)
- Diamond-Blackfan anemia 4 (RPS17)
- Diamond-Blackfan anemia 5 (RPL35A)
- Diamond-Blackfan anemia 6 (RPL5)
- Diamond-Blackfan anemia 7 (RPL11)
- Diamond-Blackfan anemia 8 (RPS7)
- Diamond-Blackfan anemia 9 (RPS10)
- Diamond-blackfan anemia 3 (RPS24)
- Distal renal tubular acidosis 4 with hemolytic anemia (SLC4A1)
- Dyserythropoietic anemia, congenital, type II (SEC23B)
- Dyserythropoietic anemia, congenital, type Ia (CDAN1)
- Dyserythropoietic anemia, congenital, type Ib (C15orf41 syn. CDIN1)
- Dyskeratosis congenita, AD 3 (TINF2)
- Dyskeratosis congenita, AR 2 (NHP2)
- Dyskeratosis congenita, AR 3 (WRAP53)
- Dyskeratosis congenita, XL (DKC1)
- Elliptocytosis-1 (EPB41)
- Elliptocytosis-2 (SPTA1)
- Elliptocytosis-3 (SPTB)
- Exocrine pancreatic insufficiency, dyserythropoietic anemia + calvarial hyperostosis (COX4I2)
- Familial MDS; Myelodysplastic syndromes (CEBPA)
- Fanconi anemia, complementation group A (FANCA)
- Fanconi anemia, complementation group B (FANCB)
- Fanconi anemia, complementation group C (FANCC)
- Fanconi anemia, complementation group D1 (BRCA2)
- Fanconi anemia, complementation group D2 (FANCD2)
- Fanconi anemia, complementation group E (FANCE)
- Fanconi anemia, complementation group F (FANCF)
- Fanconi anemia, complementation group G (FANCG)
- Fanconi anemia, complementation group I (FANCI)
- Fanconi anemia, complementation group J (BRIP)
- Fanconi anemia, complementation group L (FANCL)
- Fanconi anemia, complementation group N (PALB2)
- Fanconi anemia, complementation group O (RAD51C)
- Fanconi anemia, complementation group P (SLX4)
- Fanconi anemia, complementation group Q (ERCC4)
- Fanconi anemia, complementation group S (BRCA1)
- Fanconi anemia, complementation group T (UBE2T)
- GLUT1 deficiency syndrome 1, infantile onset, severe (SLC2A1)
- GLUT1 deficiency syndrome 2, childhood onset (SLC2A1)
- Glycogen storage disease VII (PFKM)
- Glycogen storage disease XII (ALDOA)
- Hemolytic anemia due to adenylate kinase deficiency (AK1)
- Hemolytic anemia due to gamma-glutamylcysteine synthetase deficiency (GCLC)
- Hemolytic anemia due to hexokinase deficiency (HK1)
- Hemolytic anemia due to triosephosphate isomerase deficiency (TPI1)
- Hemolytic anemia, CD59-mediated, with/-out immune-mediated polyneuropathy (CD59)
- Hemolytic anemia, G6PD deficient; favism (G6PD)
- Homocystinuria-megaloblastic anemia, cbl E type (MTRR)
- Homocystinuria-megaloblastic anemia, cblG complementation type (MTR)
- Imerslund-Grasbeck syndrome 1 (CUBN)
- Imerslund-Grasbeck syndrome 2 (AMN)
- Immunodeficiency 52 (LAT)
- Immunodeficiency, common variable, 13 (IKZF1)
- Iron-refractory iron deficiency anemia (TMPRSS6)
- MIRAGE s. [myelodyspl., infection, growth restr., adr. hypoplasia, genit. abn., enteropathy] (SAMD9)
- Majeed syndrome (LPIN2)
- Megaloblastic anemia due to dihydrofolate reductase deficiency (DHFR)
- Mental retardation-hypotonic facies syndrome, XL (ATRX)
- Monosomy 7 myelodysplasia and leukemia syndrome 1 (SAMD9L)
- Myelodysplastic syndrome (MDS), Paediatric (CBL)
- Myelodysplastic syndrome (MDS), Paediatric (FLT3)
- Myelodysplastic syndrome, susceptibility to (GATA2)
- Myelofibrosis with myeloid metaplasia, somatic (MPL)
- Myelokathexis, isolated (CXCR4)
- Myopathy, lactic acidosis + sideroblastic anemia 1 (PUS1)
- Myopathy, lactic acidosis + sideroblastic anemia 2 (YARS2)
- Neutropenia, cyclic (ELANE)
- Neutropenia, nonimmune chronic idiopathic, of adults (GFI1)
- Neutropenia, severe congenital 1, AD (ELANE)
- Neutropenia, severe congenital 2, AD (GFI1)
- Neutropenia, severe congenital 3, AR (HAX1)
- Neutropenia, severe congenital 5, AR (VPS45)
- Neutropenia, severe congenital 7, AR (CSF3R)
- Neutropenia, severe congenital, XL (WAS)
- Noonan syndrome-like disorder with/-out juvenile myelomonocytic leukemia (CBL)
- Ovalocytosis, SA type (SLC4A1)
- Overhydrated hereditary stomatocytosis (RHAG)
- Porphyria, congenital erythropoietic (UROS)
- Protoporphyria, erythropoietic, XL (ALAS2)
- Pulmonary fibrosis and/or bone marrow failure, telomere-related, 1 (TERT)
- Pulmonary fibrosis and/or bone marrow failure, telomere-related, 3 (RTEL)
- Pyropoikilocytosis (SPTA1)
- Pyruvate kinase deficiency (PKLR)
- Radioulnar synostosis with amegakaryocytic thrombocytopenia 1 (HOXA11)
- Revesz syndrome (TINF2)
- Shwachman-Diamond syndrome (SBDS)
- Shwachman-Diamond syndrome 2 (EFL1)
- Sneddon syndrome (ADA2)
- Spherocytosis, type 1 (ANK1)
- Spherocytosis, type 2 (SPTB)
- Spherocytosis, type 3 (SPTA1)
- Spherocytosis, type 4 (SLC4A1)
- Spherocytosis, type 5 (EPB42)
- Syndromic intellectual disability; cytopenia [panelapp] (RAP1B)
- Thiamine-responsive megaloblastic anemia syndrome (SLC19A2)
- Thrombotic thrombocytopenic purpura, hereditary (ADAMTS13)
- Transcobalamin II deficiency (TCN2)
- Vasculitis, autoinflammation, immunodeficiency + hematologic defects syndrome (ADA2)
- WHIM syndrome (CXCR4)
- [Blood groups Diego, Froese, Swann, Waldner, Wright (SLC4A1)
- [Malaria, resistance to (SLC4A1)
Heredity, heredity patterns etc.
- AD
- AR
- SMu
- Sus
- XL
- XLR
OMIM-Ps
- Multiple OMIM-Ps
ICD10 Code
Bioinformatics and clinical interpretation
No text defined