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Interdisciplinary CompetenceMolecular Diagnostics
Know how in the analysis of genetic material.
For the benefit of patients.

IllnessCancer precaution panel, genetic [private medical service]

Summary

Short information

A curated panel containing >130 genes for the comprehensive analysis of the vast majority of all known tumor entities for reasons of precaution

ID
KP6555
Number of genes
106 Accredited laboratory test
Examined sequence length
50,1 kb (Core-/Core-canditate-Genes)
264,3 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Test material
  • EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications

NGS +

 

Gene panel

Selected genes

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
APC8532NM_000038.6AD
BRCA210257NM_000059.4AD, AR, Sus
CDKN2A471NM_000077.5AD
EPCAM945NM_002354.3AD
MLH12271NM_000249.4AD
MSH22805NM_000251.3AD
MSH64083NM_000179.3AD
MUTYH1650NM_001128425.2AR
NF18457NM_001042492.3AD
PMS22589NM_000535.7AD, Sus
PTEN1212NM_000314.8AD, AR
RB12787NM_000321.3AD
RET3345NM_020975.6AD
VHL642NM_000551.4AD
AIP993NM_003977.4AD
AKT11443NM_005163.2AD
ALK4863NM_004304.5AD
ATM9171NM_000051.4AD, AR
ATR7935NM_001184.4AD
BAP12190NM_004656.4AD
BARD12334NM_000465.4AR, Sus
BLM4254NM_000057.4AR
BMPR1A1599NM_004329.3AD
BRAF2301NM_004333.6AD
BRIP13750NM_032043.3AD
CDC731596NM_024529.5AD
CDH12649NM_004360.5AD
CDK4912NM_000075.4AD
CDKN1B597NM_004064.5AD
CHEK21632NM_007194.4AD
CYLD2871NM_015247.3AD
DDB21284NM_000107.3AR
DICER15769NM_177438.3AD
DIS3L22658NM_152383.5AR
ERCC1972NM_202001.3AR
ERCC22283NM_000400.4AR
ERCC32349NM_000122.2AR
ERCC42751NM_005236.3AR
ERCC53561NM_000123.4AR
EXT12241NM_000127.3AD
EXT22157NM_207122.2AD
FANCA4368NM_000135.4AR
FANCB2580NM_001018113.3XL
FANCC1677NM_000136.3AR
FANCE1611NM_021922.3AR
FANCF1125NM_022725.4AR
FANCG1869NM_004629.2AR
FANCI3987NM_001113378.2AR
FANCL1128NM_018062.4AR
FANCM6147NM_020937.4AR
FH1533NM_000143.4AD
FLCN1740NM_144997.7AD
GREM1555NM_013372.7AD
HRAS570NM_005343.4AD
KIT2931NM_000222.3AD
KRAS567NM_004985.5AD
LIG42736NM_002312.3AR
LZTR12523NM_006767.4AD, AR
MAP2K11182NM_002755.4AD
MAP2K21203NM_030662.4AD
MAX483NM_002382.5AD
MEN11833NM_130799.2AD
MET4227NM_001127500.3AD
MITF1260NM_000248.4AD
MSH33414NM_002439.5AR
NBN2265NM_002485.5AR
NF21788NM_000268.4AD
NRAS570NM_002524.5AD
NTHL1915NM_002528.7AR
PALB23561NM_024675.4AD
POLD13324NM_002691.4AD
POLE6861NM_006231.4AD
POLH2142NM_006502.3AR
POT11905NM_015450.3Sus
PRKAR1A1146NM_002734.5AD
PRSS1744NM_002769.5AD
PTCH14344NM_000264.5AD
PTPN111782NM_002834.5AD
RAD511023NM_001164269.2AD
RAD51C1131NM_058216.3AR, AD
RAD51D987NM_002878.4AD
RAF11947NM_002880.4AD
RECQL43628NM_004260.4AR
SDHA1995NM_004168.4AD
SDHAF2501NM_017841.4AD
SDHB843NM_003000.3AD
SDHC510NM_003001.5AD
SDHD480NM_003002.4AD, AR
SEC23B2304NM_006363.6AD
SLX45505NM_032444.4AR
SMAD41659NM_005359.6AD
SMARCA45040NM_001128849.3AD, AR
SMARCB11158NM_003073.5AD
SMARCE11236NM_003079.5AD
STK111302NM_000455.5AD
SUFU1455NM_016169.4AD, AR
TMEM127717NM_017849.4AD
TP531182NM_000546.6AD
TSC13495NM_000368.5AD
TSC25424NM_000548.5AD
UBE2T594NM_014176.4AR
WRN4299NM_000553.6AR
WT11569NM_024426.6AD
XPA822NM_000380.4AR
XPC2823NM_004628.5AR
XRCC2843NM_005431.2AR

Informations about the disease

Clinical Comment

Up to 10% of all cancers are hereditary, i.e. at least one mutation was transmitted from at least one parent. A hereditary cancer syndrome is a genetic predisposition to certain cancers, often occurring at a young age and caused by inherited pathogenic variants in one or more genes. Although a mutation is defined as any change in the DNA sequence that deviates from normal, a pathogenic variant or deleterious mutation is a genetic change that increases a person's predisposition to a particular disease or disorder. Often, these predisposing pathogenic variants also lead to cancer that affects multiple organs in the same individual or family. Genetic testing of malignant tumor tissue (somatic) is increasingly used in oncology to identify potential targeted therapies for cancer treatment. Most hereditary cancer syndromes have an autosomal dominant mode of inheritance. Cancers commonly encountered by gynecologists, such as breast, ovarian, endometrial and colon cancers, may be part of a specific hereditary cancer syndrome. The most common hereditary cancers among the >50 syndromes include hereditary breast and ovarian cancer, Lynch syndrome, Li-Fraumeni syndrome, Cowden syndrome, Peutz-Jeghers syndrome, hereditary diffuse gastric cancer, von Hippel-Lindau syndrome and in children, retinoblastoma and Wilms tumor. This hereditary cancer risk panel includes more than 100 genes to identify individuals (and families) at increased risk for developing certain cancers. The overall diagnostic yield is still unknown. A negative molecular genetic result does not rule out predisposition to cancer.

Reference: doi 10.1097/01.JAA.0000721648.46099.2c

 

Synonyms
  • Genetic test for cancer prevention
  • Tumor panel
  • Allelic: Blepharocheilodontic syndrome 1 (CDH1)
  • Allelic: COMMAD syndrome (MITF)
  • Allelic: Congenital myopathy with excess of muscle spindles (HRAS)
  • Allelic: Desmoid disease, hereditary (APC)
  • Allelic: Diarrhea 5, with tufting enteropathy, congenital (EPCAM)
  • Allelic: FILS [Facial dysmorphism, Immunodeficiency, Livedo, Short stature] syndrome (POLE)
  • Allelic: Frontotemporal dementia and/or amyotrophic lateral sclerosis 8 (CYLD)
  • Allelic: Fumarase deficiency (FH)
  • Allelic: Hirschsprung disease, protection against (RET)
  • Allelic: Hirschsprung disease, susceptibility to, 1 (RET)
  • Allelic: Holoprosencephaly 7 (PTCH1)
  • Allelic: Hyperparathyroidism, familial primary (CDC73)
  • Allelic: IMAGE-I syndrome (POLE)
  • Allelic: Kury-Isidor syndrome (BAP1)
  • Allelic: Macrocephaly/autism syndrome (PTEN)
  • Allelic: Mandibular hypoplasia, deafness, progeroid features, lipodystrophy syndrome (POLD1)
  • Allelic: Mirror movements 2 (RAD51)
  • Allelic: Mitochondrial complex II deficiency, nuclear type 1 (SDHA)
  • Allelic: Mitochondrial complex II deficiency, nuclear type 3 (SDHD)
  • Allelic: Mitochondrial complex II deficiency, nuclear type 4 (SDHB)
  • Allelic: Neurodegeneration with ataxia + late-onset optic atrophy (SDHA)
  • Allelic: Piebaldism (KIT)
  • Allelic: Pigmented nodular adrenocortical disease, primary, 1 (PRKAR1A)
  • Allelic: Pneumothorax, primary spontaneous (FLCN)
  • Allelic: Seizures, scoliosis + macrocephaly syndrome (EXT2)
  • Allelic: Tietz albinism-deafness syndrome (MITF)
  • Allelic: Waardenburg syndrome, type 2A (MITF)
  • Allelic: Waardenburg syndrome/ocular albinism, digenic (MITF)
  • Acrodysostosis 1, with/-out hormone resistance (PRKAR1A) 3
  • Adenomas, multiple colorectal (MUTYH)
  • Adenomatous polyposis coli (APC)
  • Adrenocortical carcinoma, pediatric (TP53)
  • Allelic: Cardiomyopathy, dilated, 1GG (SDHA)
  • Allelic: Coffin-Siris syndrome 3 (SMARCB1)
  • Allelic: Coffin-Siris syndrome 4 (SMARCA4)
  • Allelic: Coffin-Siris syndrome 5 (SMARCE1)
  • Allelic: Dyserythropoietic anemia, congenital, type II (SEC23B)
  • Allelic: Erythrocytosis, familial, 2 (VHL)
  • Allelic: Myhre syndrome (SMAD4)
  • Allelic: Nephrotic syndrome, type 4 (WT1)
  • Allelic: Premature ovarian failure 17 (XRCC2)
  • Allelic: Spermatogenic failure 50 (XRCC2)
  • Aplastic anemia (NBN)
  • Ataxia-telangiectasia (ATM)
  • Baller-Gerold syndrome (RECQL4)
  • Basal cell carcinoma 7 (TP53)
  • Basal cell nevus syndrome (PTCH1)
  • Basal cell nevus syndrome (SUFU)
  • Birt-Hogg-Dube syndrome (FLCN)
  • Bloom syndrome (BLM)
  • Brain tumor-polyposis syndrome 2 (APC)
  • Breast cancer, early-onset, susceptibility to (BRIP1)
  • Breast cancer, male, susceptibility to (BRCA2)
  • Breast cancer, susceptibility to (PALB2)
  • Breast cancer, susceptibility to (ATM)
  • Breast cancer, susceptibility to (CHEK2)
  • Breast cancer, susceptibility to (RAD51)
  • Breast-ovarian cancer, familial, 1 (BRCA1)
  • Breast-ovarian cancer, familial, 2 (BRCA2)
  • Breast-ovarian cancer, familial, susceptibility to, 3 (RAD51C)
  • Breast-ovarian cancer, familial, susceptibility to, 4 (RAD51D)
  • Brooke-Spiegler syndrome (CYLD)
  • Carcinoid tumor of lung (MEN1)
  • Carney complex, type 1 (PRKAR1A)
  • Cerebrooculofacioskeletal syndrome 2 (ERCC2)
  • Cerebrooculofacioskeletal syndrome 3 (ERCC5)
  • Cerebrooculofacioskeletal syndrome 4 (ERCC1)
  • Chondrosarcoma (EXT1)
  • Choroid plexus papilloma (TP53)
  • Colorectal cancer, hereditary nonpolyposis, type 1 (MSH2)
  • Colorectal cancer, hereditary nonpolyposis, type 2 (MLH1)
  • Colorectal cancer, hereditary nonpolyposis, type 4 (PMS2)
  • Colorectal cancer, hereditary nonpolyposis, type 5 (MSH6)
  • Colorectal cancer, hereditary nonpolyposis, type 8 (EPCAM)
  • Colorectal cancer, susceptibility to (CHEK2)
  • Colorectal cancer, susceptibility to, 10 (POLD1)
  • Colorectal cancer, susceptibility to, 12 (POLE)
  • Costello syndrome (HRAS)
  • Cowden syndrome 1 (PTEN)
  • Cowden syndrome 6 (AKT1)
  • Cowden syndrome 7 (SEC23B)
  • Cylindromatosis, familial (CYLD)
  • Denys-Drash syndrome (WT1)
  • Diffuse gastric + lobular breast cancer syndrome with/-out cleft lip +/- palate (CDH1)
  • Endometrial cancer, familial (MSH6)
  • Exostoses, multiple, type 1 (EXT1)
  • Exostoses, multiple, type 2 (EXT2)
  • Familial adenomatous polyposis 3 (NTHL1)
  • Familial adenomatous polyposis 4 (MSH3)
  • Fanconi anemia, complementation group A-M (FANCA-FANCM)
  • Fanconi anemia, complementation group D1 (BRCA2)
  • Fanconi anemia, complementation group J (BRIP1)
  • Fanconi anemia, complementation group N (PALB2)
  • Fanconi anemia, complementation group O (RAD51C)
  • Fanconi anemia, complementation group P (SLX4)
  • Fanconi anemia, complementation group Q (ERCC4)
  • Fanconi anemia, complementation group R (RAD51)
  • Fanconi anemia, complementation group S (BRCA1)
  • Fanconi anemia, complementation group T (UBE2T)
  • Fanconi anemia, complementation group U (XRCC2)
  • Frasier syndrome (WT1)
  • Gardner syndrome (APC)
  • Gastrointestinal stromal tumor (SDHB)
  • Gastrointestinal stromal tumor (SDHC)
  • Gastrointestinal stromal tumor, familial (KIT)
  • Glioblastoma 3 (BRCA2)
  • Glioma susceptibility 1 (TP53)
  • Glioma susceptibility 2 (PTEN)
  • Glioma susceptibility 9 (POT1)
  • Goiter, multinodular 1, with/-out Sertoli-Leydig cell tumors (DICER1)
  • Hereditary mixed polyposis syndrome [panelapp] (GREM1)
  • Hyperparathyroidism-jaw tumor syndrome (CDC73)
  • Joubert syndrome 32 (SUFU)
  • Juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome (SMAD4)
  • LIG4 syndrome (LIG4)
  • Leiomyomatosis and renal cell cancer (FH)
  • Leukemia, acute lymphoblastic (NBN)
  • Leukemia, juvenile myelomonocytic (NF1)
  • Lhermitte-Duclos disease (PTEN)
  • Li-Fraumeni syndrome 2 (CHEK2)
  • Lymphangioleiomyomatosis (TSC1)
  • Mastocytosis, cutaneous (KIT)
  • Meacham syndrome (WT1)
  • Medullary thyroid carcinoma (RET)
  • Medulloblastoma (BRCA2)
  • Medulloblastoma, desmoplastic (SUFU)
  • Melanoma + neural system tumor syndrome (CDKN2A)
  • Melanoma, cutaneous malignant, 2 (CDKN2A)
  • Melanoma, cutaneous malignant, 3 (CDK4)
  • Melanoma, cutaneous malignant, susceptibility to, 10 (POT1)
  • Melanoma, cutaneous malignant, susceptibility to, 8 (MITF)
  • Melanoma-pancreatic cancer syndrome (CDKN2A)
  • Meningioma (PTEN)
  • Meningioma, familial, susceptibility to (SMARCE1)
  • Meningioma, familial, susceptibility to (SUFU)
  • Mismatch repair cancer syndrome 1 (MLH1)
  • Mismatch repair cancer syndrome 2 (MSH2)
  • Mismatch repair cancer syndrome 3 (MSH6)
  • Mismatch repair cancer syndrome 4 (PMS2)
  • Muir-Torre syndrome (MLH1)
  • Muir-Torre syndrome (MSH2)
  • Multiple endocrine neoplasia (MEN1)
  • Multiple endocrine neoplasia IIA (RET)
  • Multiple endocrine neoplasia IIB (RET)
  • Multiple endocrine neoplasia, type IV (CDKN1B)
  • Multiple myeloma, resistance to (LIG4)
  • Myxoma, intracardiac (PRKAR1A)
  • Neurofibromatosis, familial spinal (NF1)
  • Neurofibromatosis, type 1 (NF1)
  • Neurofibromatosis, type 2 (NF2)
  • Neurofibromatosis-Noonan syndrome (NF1)
  • Nijmegen breakage syndrome (NBN)
  • Noonan syndrome 2, 10 (LZTR1)
  • Osteofibrous dysplasia, susceptibility to (MET)
  • Osteosarcoma (TP53)
  • Pancreatic cancer 2 (BRCA2)
  • Pancreatic cancer, susceptibility to, 3 (PALB2)
  • Pancreatic cancer, susceptibility to, 4 (BRCA1)
  • Pancreatitis, hereditary (PRSS1)
  • Paraganglioma + gastric stromal sarcoma (SDHB)
  • Paraganglioma + gastric stromal sarcoma (SDHC)
  • Paraganglioma and gastric stromal sarcoma (SDHD)
  • Paragangliomas 1, with/-out deafness (SDHD)
  • Paragangliomas 2 (SDHAF2)
  • Paragangliomas 3 (SDHC)
  • Paragangliomas 4 (SDHB)
  • Paragangliomas 5 (SDHA)
  • Parathyroid adenoma with cystic changes (CDC73)
  • Parathyroid carcinoma (CDC73)
  • Peutz-Jeghers syndrome (STK11)
  • Pheochromocytoma (RET)
  • Pheochromocytoma (SDHB)
  • Pheochromocytoma (SDHD)
  • Pheochromocytoma (VHL)
  • Pheochromocytoma, susceptibility to (MAX)
  • Pheochromocytoma, susceptibility to (TMEM127)
  • Pituitary adenoma 1, multiple types (AIP)
  • Pituitary adenoma predisposition (AIP)
  • Pleuropulmonary blastoma (DICER1)
  • Polyposis syndrome, hereditary mixed, 2(BMPR1A)
  • Polyposis, juvenile intestinal (SMAD4)
  • Polyposis, juvenile intestinal (BMPR1A)
  • Prostate cancer (BRCA2)
  • Prostate cancer, familial, susceptibility to (CHEK2)
  • Prostate cancer, susceptibility to (CDH1)
  • RAPADILINO syndrome (RECQL4)
  • Renal cell carcinoma, papillary (PRCC)
  • Retinoblastoma (RB1)
  • Retinoblastoma, trilateral (RB1)
  • Rhabdoid tumor predisposition syndrome 1 (SMARCB1)
  • Rhabdoid tumor predisposition syndrome 2 (SMARCA4)
  • Rhabdomyosarcoma, embryonal, 2 (DICER1)
  • Rothmund-Thomson syndrome, type 2 (RECQL4)
  • Schwannomatosis-1, susceptibility to (SMARCB1)
  • Schwannomatosis-2, susceptibility to (LZTR1)
  • Trichoepithelioma, multiple familial, 1 (CYLD)
  • Trichothiodystrophy 1, photosensitive (ERCC2)
  • Trichothiodystrophy 2, photosensitive (ERC3)
  • Tuberous sclerosis-1 (TSC1)
  • Tuberous sclerosis-2 (TSC2)
  • Tumor predisposition syndrome (BAP1)
  • Watson syndrome (NF1)
  • Werner syndrome (WRN)
  • Wilms tumor (BRCA2)
  • Wilms tumor, type 1 (WT1)
  • XFE progeroid syndrome (ERCC4)
  • Xeroderma pigmentosum, group A (XPA)
  • Xeroderma pigmentosum, group B (ERC3)
  • Xeroderma pigmentosum, group C (XPC)
  • Xeroderma pigmentosum, group D (ERCC2)
  • Xeroderma pigmentosum, group E, DDB-negative subtype (DDB2)
  • Xeroderma pigmentosum, group F (ERCC4)
  • Xeroderma pigmentosum, group G (ERCC5)
  • Xeroderma pigmentosum, group G/Cockayne syndrome (ERCC5)
  • Xeroderma pigmentosum, type F/Cockayne syndrome (ERCC4)
  • Xeroderma pigmentosum, variant type (POLH)
  • von Hippel-Lindau syndrome (VHL)
Heredity, heredity patterns etc.
  • AD
  • AR
  • Sus
  • XL
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

Test-Stärken

  • DAkkS-akkreditiertes Labor
  • EU-Richtlinie für IVD in Umsetzung
  • Qualitäts-kontrolliert arbeitendes Personal
  • Leistungsstarke Sequenzierungstechnologien, fortschrittliche Target-Anreicherungsmethoden und Präzisions-Bioinformatik-Pipelines sorgen für überragende analytische Leistung
  • Sorgfältige Kuratierung klinisch relevanter und wissenschaftlich begründeter Gen-Panels
  • eine Vielzahl nicht Protein-kodierender Varianten, die in unseren klinischen NGS-Tests mit erfasst werden
  • unser strenges Variantenklassifizierungsschema nach ACMG-Kriterien
  • unser systematischer klinischer Interpretations-Workflow mit proprietärer Software ermöglicht die genaue und nachvollziehbare Verarbeitung von NGS-Daten
  • unsere umfassenden klinischen Aussagen

Testeinschränkungen

  • Gene mit eingeschränkter Abdeckung werden gekennzeichnet
  • Gene mit kompletten oder partiellen Duplikationen werden gekennzeichnet
  • es wird angenommen, dass ein Gen suboptimal abgedeckt ist, wenn >90% der Nukleotide des Gens bei einem Mapping-Qualitätsfaktor von >20 (MQ>20) nicht abgedeckt sind
  • die Sensitivität der Diagnostik zur Erkennung von Varianten mit genannten Testeinschränkungen ist möglicherweise begrenzt bei:
  • Gen-Konversionen
  • komplexe Inversionen
  • Balancierte Translokationen
  • Mitochondriale Varianten
  • Repeat-Expansionen, sofern nicht anders dokumentiert
  • nicht kodierende Varianten, die Krankheiten verursachen, die von diesem Panel nicht mit abgedeckt werden
  • niedriger Mosaik-Status
  • Repeat-Blöcke von Mononukleotiden
  • Indels >50bp (Insertionen-Deletionen)
  • Deletionen oder Duplikationen einzelner Exons
  • Varianten innerhalb von Pseudogenen
  • die analytische Sensitivität kann geringer ausfallen werden, wenn die DNA nicht von amedes genetics extrahiert wurde

Laboratory requirement

  • Die in grün gezeigten Gene sind kuratiert und werden als Gen-Panel untersucht. Eine Erweiterung des Panels (blau gezeigte Gene, jeweils ebenfalls kuratiert) kann auf Anfrage erfolgen. Sofern unter "Erweitertes Panel" ein Minuszeichen angezeigt wird, sind nur Core-/Basis-Gene verfügbar.

  • Für die Anforderung einer genetischen Untersuchung senden Sie uns bitte die Krankheits-ID auf einem Überweisungsschein. Bitte die Material-Angabe beachten.

  • Für privat versicherte Patienten empfehlen wir einen Antrag auf Kostenübernahme bei der Krankenversicherung.

  • Die Untersuchung wird auch für Selbstzahler angeboten.