IllnessCerebellar hypoplasia, expanded differential diagnosis
Summary
Short information
Comprehensive differential diagnostic panel for Cerebellar hypoplasia comprising 17 core candidate genes and altogether 63 curated genes according to the clinical signs
ID
KP9124
Number of genes
67
Accredited laboratory test
Examined sequence length
35,6 kb (Core-/Core-canditate-Genes)
191,7 kb (Extended panel: incl. additional genes)
191,7 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Test material
- EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications
NGS +
Gene panel
Selected genes
Name | Exon Length (bp) | OMIM-G | Referenz-Seq. | Heredity |
---|---|---|---|---|
AMPD2 | 2478 | NM_001368809.2 | AR | |
CASK | 2766 | NM_003688.3 | XL | |
CHMP1A | 591 | NM_002768.5 | AR | |
CLP1 | 1086 | NM_001142597.2 | AR | |
EXOSC3 | 828 | NM_016042.4 | AR | |
OPHN1 | 2409 | NM_002547.3 | XLR | |
RARS2 | 1737 | NM_020320.5 | AR | |
RELN | 10383 | NM_005045.4 | AR | |
SEPSECS | 1506 | NM_016955.4 | AR | |
TSEN2 | 1398 | NM_025265.4 | AR | |
TSEN34 | 933 | NM_024075.5 | AR | |
TSEN54 | 1581 | NM_207346.3 | AR | |
TUBA1A | 1356 | NM_006009.4 | AD | |
TUBB2B | 1338 | NM_178012.5 | AD | |
TUBB3 | 1353 | NM_006086.4 | AD | |
VLDLR | 2622 | NM_003383.5 | AR | |
VRK1 | 1191 | NM_003384.3 | AR | |
ADGRG1 | 2064 | NM_005682.7 | AR | |
ARMC9 | 3275 | NM_025139.6 | AR | |
ATAD3A | 1761 | NM_001170535.3 | AR | |
ATP8A2 | 3567 | NM_016529.6 | AR | |
B3GALNT2 | 1503 | NM_152490.5 | AR | |
B4GAT1 | 1248 | NM_006876.3 | AR | |
B9D2 | 528 | NM_030578.4 | AR | |
CA8 | 873 | NM_004056.6 | AR | |
CACNA1G | 6945 | NM_018896.5 | AD | |
CDK5 | 783 | NM_001164410.3 | AR | |
COASY | 1695 | NM_025233.7 | AR | |
COL3A1 | 4401 | NM_000090.4 | AD, AR | |
CRPPA | 1356 | NM_001101426.4 | AR | |
CWF19L1 | 1617 | NM_018294.6 | AR | |
DAG1 | 2688 | NM_004393.6 | n.k. | |
DCC | 4344 | NM_005215.4 | AR | |
DDX3X | 1986 | NM_001193416.3 | XL | |
DKC1 | 1545 | NM_001363.5 | XLR | |
EXOSC8 | 831 | NM_181503.3 | AR | |
FKRP | 1488 | NM_024301.5 | AR | |
FKTN | 1386 | NM_001079802.2 | AR | |
GMPPB | 1164 | NM_013334.4 | AR | |
HEATR5B | 6251 |
| NM_019024.3 | AR |
ITPR1 | 8088 | NM_002222.7 | AD, AR | |
KCNC3 | 2274 | NM_004977.3 | AD | |
LAMA1 | 9228 | NM_005559.4 | AR | |
LARGE1 | 2271 | NM_004737.7 | AR | |
MACF1 | 16293 | NM_012090.5 | AD | |
PCLO | 14808 | NM_014510.3 | AR | |
PHGDH | 1602 | NM_006623.4 | AR | |
POMGNT1 | 1983 | NM_017739.4 | AR | |
POMGNT2 | 1743 | NM_032806.6 | AR | |
POMT1 | 2244 | NM_007171.4 | AR | |
POMT2 | 2253 | NM_013382.7 | AR | |
PTF1A | 987 | NM_178161.3 | AR | |
ROBO3 | 4161 | NM_022370.4 | AR | |
RXYLT1 | 1355 | NM_014254.3 | AR | |
SLC25A46 | 1257 | NM_138773.4 | AR | |
SNAP29 | 777 | NM_004782.4 | AR | |
SNX14 | 2841 | NM_153816.6 | AR | |
SPTBN2 | 7173 | NM_006946.4 | AD, AR | |
SRD5A3 | 957 | NM_024592.5 | AR | |
TBC1D23 | 2100 | NM_001199198.3 | AR | |
TERT | 3399 | NM_198253.3 | AR | |
TINF2 | 1356 | NM_001099274.3 | AD | |
TOE1 | 1488 | NM_025077.4 | AR | |
TSEN15 | 390 | NM_001127394.4 | AR | |
VPS35L | 3462 | NM_020314.7 | AR | |
VPS53 | 2499 | NM_001128159.3 | AR | |
WDR81 | 5826 | NM_001163809.2 | AR |
Informations about the disease
Clinical Comment
Group of heterogenous disorders
Synonyms
- Alias: Zerebellare Hypoplasie
- Allelic: Axenfeld-Rieger syndrome, type 3 (FOXC1)
- Allelic: COACH syndrome 2 (CC2D2A)
- Allelic: Cardiomyopathy, dilated, 1X (FKTN)
- Allelic: Colorectal cancer, somatic (DCC)
- Allelic: Congenital heart defects, nonsyndromic, 1, XL (ZIC3)
- Allelic: Dyskeratosis congenita, AD 2 (TERT)
- Allelic: Dyskeratosis congenita, AD 3 (TINF2)
- Allelic: Ehlers-Danlos syndrome, vascular type (COL3A1)
- Allelic: Epilepsy, familial temporal lobe, 7 (RELN)
- Allelic: Esophageal carcinoma, somatic (DCC)
- Allelic: FG syndrome 4 (CASK)
- Allelic: Fibrosis of extraocular muscles, congenital, 3A (TUBB3)
- Allelic: Gastrointestinal defects + immunodeficiency syndrome 2 (PI4KA)
- Allelic: Heterotaxy, visceral, 1, X (ZIC3)
- Allelic: Hypertriglyceridaemia [panelapp] (CELSR2)
- Allelic: Intellectual disability [MONDO:0001071] (HEATR5B)
- Allelic: Leukemia, acute myeloid (TERT)
- Allelic: Melanoma, cutaneous malignant, 9 (TERT)
- Allelic: Mental retardation, with/-out nystagmus (CASK)
- Allelic: Muscular dystrophy-dystroglycanopathy (cong. +/- mental retardation), type B, 5(FKRP)
- Allelic: Muscular dystrophy-dystroglycanopathy [cong. with mental retardation], type B, 1 (POMT1)
- Allelic: Muscular dystrophy-dystroglycanopathy [cong. with mental retardation], type B, 14 (GMPPB)
- Allelic: Muscular dystrophy-dystroglycanopathy [cong. with mental retardation], type B, 2 (POMT2)
- Allelic: Muscular dystrophy-dystroglycanopathy [cong. with mental retardation], type B, 3 (POMGNT1)
- Allelic: Muscular dystrophy-dystroglycanopathy [cong. with mental retardation], type B, 6 (LARGE1)
- Allelic: Muscular dystrophy-dystroglycanopathy [cong. without mental retardation], type B, 4 (FKTN)
- Allelic: Muscular dystrophy-dystroglycanopathy [limb-girdle], type C, 1 (POMT1)
- Allelic: Muscular dystrophy-dystroglycanopathy [limb-girdle], type C, 14 (GMPPB)
- Allelic: Muscular dystrophy-dystroglycanopathy [limb-girdle], type C, 2 (POMT2)
- Allelic: Muscular dystrophy-dystroglycanopathy [limb-girdle], type C, 3 (POMGNT1)
- Allelic: Muscular dystrophy-dystroglycanopathy [limb-girdle], type C, 4 (FKTN)
- Allelic: Muscular dystrophy-dystroglycanopathy [limb-girdle], type C, 5 (FKRP)
- Allelic: Muscular dystrophy-dystroglycanopathy [limb-girdle], type C, 7 (CRPPA)
- Allelic: Muscular dystrophy-dystroglycanopathy [limb-girdle], type C, 8 (POMGNT2)
- Allelic: Muscular dystrophy-dystroglycanopathy [limb-girdle], type C, 9 [DAG1]
- Allelic: Neuropathy, hereditary motor + sensory, type VIB (SLC25A46)
- Allelic: Osteogenesis imperfecta, type XV (WNT1)
- Allelic: Pancreatic agenesis 2 (PTF1A)
- Allelic: Polymicrogyria, bilateral perisylvian (ADGRG1)
- Allelic: Pulmonary fibrosis and/or bone marrow failure, telomere-related, 1 (TERT)
- Allelic: Retinitis pigmentosa 76 (POMGNT1)
- Allelic: Retinitis pigmentosa 93 (CC2D2A)
- Allelic: Short-rib thoracic dysplasia 4 +/- polydactyly (TTC21B)
- Allelic: Thyroid carcinoma, follicular (MINPP1)
- Alkuraya-Kucinskas syndrome (BLTP1)
- Allelic: VACTERL association, XL (ZIC3)
- Bardet-Biedl syndrome 13 (MKS1)
- Bardet-Biedl syndrome 20 (IFT172)
- CEBALID syndrome (MN1)
- COACH syndrome 1 (TMEM67)
- Cerebellar ataxia + mental retardation with/-out quadrupedal locomotion 3 (CA8)
- Cerebellar ataxia, mental retardation + dysequilibrium syndrome 2 (WDR81)
- Cerebellar ataxia, mental retardation + dysequilibrium syndrome 4 (ATP8A2)
- Cerebellar dysfunction, impaired intellectual development, hypogonadotropic hypogonadism (PRDM13)
- Cerebellar hypoplasia + mental retardation with/-out quadrupedal locomotion 1 (VLDLR)
- Cerebellofaciodental syndrome (BRF1)
- Cerebral dysgenesis, neuropathy, ichthyosis + palmoplantar keratoderma syndrome (SNAP29)
- Chudley-McCullough syndrome (GPSM2)
- Congenital disorder of glycosylation, type Ia (PMM2)
- Congenital disorder of glycosylation, type Iq (SRD5A3)
- Cortical dysplasia, complex, with other brain malformations 1 (TUBB3)
- Cortical dysplasia, complex, with other brain malformations 7 (TUBB2B)
- Cortical dysplasia, complex, with other brain malformations 9 (CTNNA2)
- Dandy Walker Syndrome [panelapp] (FOXC1)
- Developmental + epileptic encephalopathy 66 (PACS2)
- Dyskeratosis congenita, AR 4 (AR)
- Dyskeratosis congenita, XL (DKC1)
- Fanconi anemia, complementation group B (FANCB)
- Gaze palsy, familial horizontal, with progressive scoliosis, 1 (ROBO3)
- Gaze palsy, familial horizontal, with progressive scoliosis, 2 (DCC)
- Gillespie syndrome (ITPR1)
- Harel-Yoon syndrome (ATAD3A)
- Holoprosencephaly 5 (ZIC2)
- Hydrocephalus, congenital, 3, with brain anomalies (WDR81)
- Hydrocephalus, focal epilepsy + hemiparesis [panelapp] (NID1)
- Hypogonadotropic hypogonadism 20 with or without anosmia (FGF17)
- Intellectual developmental disorder, X-linked syndromic, Snijders Blok type (DDX3X)
- Jeune syndrome (TTC21B)
- Joubert syndrome 1 (INPP5E)
- Joubert syndrome 10 (OFD1)
- Joubert syndrome 12 (KIF7)
- Joubert syndrome 13 (TCTN1)
- Joubert syndrome 14 (TMEM237)
- Joubert syndrome 15 (CEP41)
- Joubert syndrome 16 (TMEM138)
- Joubert syndrome 17 (CPLANE1)
- Joubert syndrome 18 (TCTN3)
- Joubert syndrome 19 (ZNF423)
- Joubert syndrome 2 (TMEM216)
- Joubert syndrome 20 (TMEM231)
- Joubert syndrome 21 (CSPP1)
- Joubert syndrome 23 (KIAA0586)
- Joubert syndrome 24 (TCTN2)
- Joubert syndrome 25 (CEP104)
- Joubert syndrome 26 (KATNIP)
- Joubert syndrome 27 (B9D1)
- Joubert syndrome 28 (MKS1)
- Joubert syndrome 29 (TMEM107)
- Joubert syndrome 3 (AHI1)
- Joubert syndrome 30 (ARMC9)
- Joubert syndrome 32 (SUFU)
- Joubert syndrome 34 (B9D2)
- Joubert syndrome 38 (KIAA0753)
- Joubert syndrome 5 (CEP290)
- Joubert syndrome 6 (TMEM67)
- Joubert syndrome 7 (RPGRIP1L)
- Joubert syndrome 8 (ARL13B)
- Joubert syndrome 9 (CC2D2A)
- Kahrizi syndrome (SRD5A3)
- Leukodystrophy, hypomyelinating, 9 (RARS1)
- Lissencephaly 2 [Norman-Roberts type] (RELN)
- Lissencephaly 3 (TUBA1A)
- Lissencephaly 8 (TMTC3)
- Lissencephaly 9 with complex brainstem malformation (MACF1)
- Macrothrombocytopenia, isolated, 2, AD (TUBA8)
- Meckel syndrome 11 (TMEM231)
- Meckel syndrome 13 (TMEM107)
- Meckel syndrome 2 (TMEM216)
- Meckel syndrome 3 (TMEM67)
- Meckel syndrome 6 (CC2D2A)
- Mega-corpus-callosum syndrome with cerebellar hypoplasia + cortical malformations (MAST1)
- Mental retardation + microcephaly with pontine + cerebellar hypoplasia (CASK)
- Mental retardation, XL, with cerebellar hypoplasia + distinctive facial appearance (OPHN1)
- Mental retardation, truncal obesity, retinal dystrophy + micropenis (INPP5E)
- Mirror movements 1 and/or agenesis of the corpus callosum (DCC)
- Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 10 (RXYLT1)
- Muscular dystrophy-dystroglycanopathy [cong. with brain + eye anomalies], type A, 1 (POMT1)
- Muscular dystrophy-dystroglycanopathy [cong. with brain + eye anomalies], type A, 11 (B3GALNT2)
- Muscular dystrophy-dystroglycanopathy [cong. with brain + eye anomalies], type A, 13 (B4GAT1)
- Muscular dystrophy-dystroglycanopathy [cong. with brain + eye anomalies], type A, 14 )GMPPB)
- Muscular dystrophy-dystroglycanopathy [cong. with brain + eye anomalies], type A, 2 (POMT2)
- Muscular dystrophy-dystroglycanopathy [cong. with brain + eye anomalies], type A, 3 (POMGNT1)
- Muscular dystrophy-dystroglycanopathy [cong. with brain + eye anomalies], type A, 4 (FKTN)
- Muscular dystrophy-dystroglycanopathy [cong. with brain + eye anomalies], type A, 5 (FKRP)
- Muscular dystrophy-dystroglycanopathy [cong. with brain + eye anomalies], type A, 6 (LARGE1)
- Muscular dystrophy-dystroglycanopathy [cong. with brain + eye anomalies], type A, 7 (CRPPA)
- Muscular dystrophy-dystroglycanopathy [cong. with brain + eye anomalies], type A, 8 POMGNT2)
- Muscular dystrophy-dystroglycanopathy [cong. with brain + eye anomalies], type A, 9 (DAG1)
- Neu-Laxova syndrome 1 (PHGDH)
- Neurodegeneration with brain iron accumulation 6 (COASY)
- Neurodevelopmental disorder with microcephaly, arthrogryposis + structural brain anomalies (SMPD4)
- Neurodevelopmental disorder with microcephaly, arthrogryposis, structural brain anomalies (SMPD4)
- Orofaciodigital syndrome I (OFD1)
- Orofaciodigital syndrome IV (TCTN3)
- Orofaciodigital syndrome VI (CPLANE1)
- Orofaciodigital syndrome XIV (C2CD3)
- Orofaciodigital syndrome XVI (TMEM107)
- Pancreatic + cerebellar agenesis (PTF1A)
- Phosphoglycerate dehydrogenase deficiency (PHGDH)
- Polymicrogyria +/- vascular-type EDS (COL3A1)
- Polymicrogyria with optic nerve hypoplasia (TUBA8)
- Polymicrogyria, bilateral frontoparietal (ADGRG1)
- Polymicrogyria, perisylvian, with cerebellar hypoplasia + arthrogryposis (PI4KA)
- Polymicrogyria, perisylvian, with cerebellar hypoplasia and arthrogryposis (PI4KA)
- Pontocerebellar hypoplasia [MONDO:0020135] (HEATR5B)
- Pontocerebellar hypoplasia type 10 (CLP1)
- Pontocerebellar hypoplasia type 11 (TBC1D23)
- Pontocerebellar hypoplasia type 12 (COASY)
- Pontocerebellar hypoplasia type 16 (MINPP1)
- Pontocerebellar hypoplasia type 17 (PRDM13)
- Pontocerebellar hypoplasia type 1A (VRK1)
- Pontocerebellar hypoplasia type 1B (EXOSC3)
- Pontocerebellar hypoplasia type 1C (EXOSC8)
- Pontocerebellar hypoplasia type 1E (SLC25A46)
- Pontocerebellar hypoplasia type 2A (TSEN54)
- Pontocerebellar hypoplasia type 2B (TSEN2)
- Pontocerebellar hypoplasia type 2C (TSEN34)
- Pontocerebellar hypoplasia type 2D (SEPSECS)
- Pontocerebellar hypoplasia type 2E (VPS53)
- Pontocerebellar hypoplasia type 2F (TSEN15)
- Pontocerebellar hypoplasia type 3 (PCLO)
- Pontocerebellar hypoplasia type 4 (TSEN54)
- Pontocerebellar hypoplasia type 5 (TSEN54)
- Pontocerebellar hypoplasia type 6 (RARS2)
- Pontocerebellar hypoplasia type 7 (TOE1)
- Pontocerebellar hypoplasia type 8 (CHMP1A)
- Pontocerebellar hypoplasia, hypotonia + respiratory insufficiency syndrome, neonatal lethal (ATAD3A)
- Poretti-Boltshauser syndrome (LAMA1)
- Revesz syndrome (TINF2)
- Ritscher-Schinzel syndrome 3 (C16orf62)
- Simpson-Golabi-Behmel syndrome, type 2 (OFD1)
- Spastic paraplegia 63 (AMPD2)
- Spastic paraplegia 84, AR (PI4KA)
- Spinocerebellar ataxia 13 (KCNC3)
- Spinocerebellar ataxia 15 (ITPR1)
- Spinocerebellar ataxia 29, congenital nonprogressive (ITPR1)
- Spinocerebellar ataxia 42 (CACNA1G)
- Spinocerebellar ataxia 42, early-onset, severe, with neurodevelopmental deficits (CACNA1G)
- Spinocerebellar ataxia 5 (SPTBN2)
- Spinocerebellar ataxia, AR 14 (SPTBN2)
- Spinocerebellar ataxia, AR 17 (CWF19L1)
- Spinocerebellar ataxia, AR 20 (SNX14)
- Structural brain anomalies with impaired intellectual development + craniosynostosis (ZIC1)
Heredity, heredity patterns etc.
- AD
- AR
- XL
- XLR
- n.k.
OMIM-Ps
- Multiple OMIM-Ps
ICD10 Code
Bioinformatics and clinical interpretation
No text defined