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Interdisciplinary CompetenceMolecular Diagnostics
Know how in the analysis of genetic material.
For the benefit of patients.

IllnessDiaphragmatic hernias, congenital, differential diagnosis

Summary

Short information

Comprehensive differential diagnostic panel for Diaphragmatic hernias, congenital, comprising 6 core candidate genes as well as altogether 75 curated genes according to the clinical signs

ID
ZP3999
Number of genes
58 Accredited laboratory test
Examined sequence length
12,4 kb (Core-/Core-canditate-Genes)
218,7 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Test material
  • EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications

NGS +

[Sanger]

 

Gene panel

Selected genes

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
GATA41329NM_002052.5AD
GATA61788NM_005257.6AD
MYOD1963NM_002478.5AR
MYRF3506NM_001127392.3AD
RARB1347NM_000965.5AD, AR
ZFPM23456NM_012082.4AD
ARID1A6858NM_006015.6AD
ARID1B6750NM_001374820.1AD
BRCA210257NM_000059.4AD, AR
CDKN1C951NM_000076.2AD
CHD78994NM_017780.4AD
COL3A14401NM_000090.4AD, AR
COX7B243NM_001866.3XL
DLL31857NM_016941.4AR
EFNB11041NM_004429.5XL
FBN18616NM_000138.5AD
FGFR22466NM_000141.5AD
FRAS112039NM_025074.7AR
FREM16540NM_144966.7n.k.
FREM29510NM_207361.6AR
GLI34743NM_000168.6AD
GPC31743NM_004484.4XL
HCCS807NM_005333.5XL
HDAC81134NM_018486.3XL
HES7678NM_032580.4AR
KDM6A4206NM_021140.4XL
KIF74032NM_198525.3AR
KMT2D16614NM_003482.4AD
LFNG1140NM_001040167.2AR
LRP213968NM_004525.3AR
LTBP44763NM_003573.2AR
MESP21194NM_001039958.2AR
MID12004NM_000381.4XL
MTM11812NM_000252.3XL
MYH106097NM_001256012.3AD
NDST12649NM_001543.5AR
NDUFB11462NM_001135998.3XL
NIPBL8415NM_133433.4AD
NR2F21245NM_021005.4AD
OCRL2706NM_000276.4XL
PBX11293NM_002585.4AD
PIGN2796NM_176787.5AR
POGZ4233NM_015100.4AD
PORCN1386NM_203475.3XL
RAD211896NM_006265.3AD, AR
RLIM1875NM_016120.4XL
ROBO14656NM_001145845.2AD, AR
SLC2A101626NM_030777.4AR
SLIT34593NM_001271946.2n.k.
SMARCA45040NM_001128849.3AD
SMARCB11158NM_003073.5AD
SMARCE11236NM_003079.5AD
SMC1A3702NM_006306.4XL
SMC33654NM_005445.4AD
SOX111326NM_003108.4AD
STRA62004NM_001142617.2AR
TBX61311NM_004608.4AD, AR
WT11569NM_024426.6n.k.

Informations about the disease

Clinical Comment

Defect during embryogenesis which can be non-syndromic (70%) or syndromic (30%) with posterolateral defect of diaphragm allowing passage of abdominal viscera into thorax, leading to respiratory insufficiency + persistent pulmonary hypertension

 

Synonyms
  • Allelic: Breast-ovarian cancer, familial, 2 (BRCA2)
  • Allelic: Glioblastoma 3 (BRCA2)
  • Allelic: Medulloblastoma (BRCA2)
  • Allelic: Pancreatic cancer 2 (BRCA2)
  • Allelic: Prostate cancer (BRCA2)
  • Allelic; Breast cancer, male, susceptibility to (BRCA2)
  • Apert syndrome (FGFR2)
  • Arterial tortuosity syndrome (SL2A10)
  • Beckwith-Wiedemann syndrome (imprinting defect at 11p15.5; CDKN1C)
  • CEBALID syndrome: Craniofacial defect, dysm. Ears, Brain Anomalies, expr. Language delay (MN1)
  • CHARGE syndrome (CHD7)
  • Cardiac-urogenital syndrome (MYRF)
  • Coffin-Siris syndrome (ARID1A, ARID1B, SMARCA4, SMARCB1, SMARCE1, SOX11)
  • Coffin-Siris syndrome 7 (DPF2)
  • Congenital diaphragmatic hernia + heart defects (GATA4)
  • Congenital disorder of glycosylation, type Ig (ALG12)
  • Congenital heart defects + skeletal malformations syndrome (ABL1)
  • Congenital heart defects, multiple types, 4 (NR2F2)
  • Cornelia de Lange syndrome (NIPBL, RAD21, SMC3, HDAC8, SMC1A)
  • Craniofrontonasal syndrome (EFNB1)
  • Cutis laxa, AR, type IB (EFEMP2)
  • Denys-Drash syndrome (WT1)
  • Diaphragmatic hernia type 3 (ZFPM2)
  • Diets-Jongmans syndrome (KDM3B)
  • Donnai-Barrow syndrome (LRP2)
  • Escobar syndrome (CHRNG)
  • Facial clefting, oblique, 1 (SPECC1L)
  • Fanconi anemia, complementation group D1 (BRCA2)
  • Focal dermal hypoplasia (PORCN)
  • Fraser syndrome (FRAS1, FREM2)
  • Heart defects, congenital & other congenital anomalies (GATA6)
  • Holoprosencephaly 13, XL (STAG2)
  • Kabuki syndrome (KMT2D, KDM6A)
  • LTBP4-related cutis laxa (LTBP4)
  • Marfan syndrome (FBN1)
  • Meacham syndrome (WT1)
  • Meningioma (MN1)
  • Menke-Hennekam syndrome 2 (EP300)
  • Microphthalmia with linear skin defects syndrome (COX7B, HCCS, NDUFB11)
  • Microphthalmia, syndromic (RARB, STRA6)
  • Mullegama-Klein-Martinez syndrome (STAG2)
  • Multiple congenital abnormalities [panelapp] (FOXP4)
  • Multiple congenital anomalies-hypotonia-seizures syndrome (PIGN)
  • Multiple joint dislocations, short stature, craniofacial dysm. +/- congenital heart defects (B3GAT3)
  • Multiple pterygium syndrome, lethal type (CHRNG)
  • Neurodevelopmental disorder [panelapp] (FOXP4)
  • Rubinstein-Taybi syndrome 2 (EP300)
  • Simpson-Golabi-Behmel syndrome type 1 (GPC3)
  • Sotos syndrome (NSD1)
  • Spondylocostal dysostosis (DLL3, HES7, LFNG, MESP2, RIPPLY2, TBX6)
  • Teebi hypertelorism syndrome 1 (SPECC1L)
  • Tonne-Kalscheuer syndrome (RLIM)
  • Vascular Ehlers-Danlos syndrome (COL3A1)
  • White-Sutton syndrome (POGZ)
  • Wilms tumor (BRCA2)
  • Witteveen-Kolk syndrome (SIN3A)
Heredity, heredity patterns etc.
  • AD
  • AR
  • XL
  • n.k.
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

No text defined