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IllnessEntzündliche Darmerkrankungen + infantile Enterokolitis, monogen; DD

Summary

Short information

Comprehensive differential diagnostic panel for inflammatory intestinal diseases and infantile enterocolitis (monogenic ) comprising 63 curated genes according to the clinical signs

ID
EP3392
Number of loci
Loci typeCount
Gen62
Accredited laboratory test
Examined sequence length
34,2 kb (Core-/Core-canditate-Genes)
133,9 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Test material
  • EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications

NGS +

 

Loci panel

Gen

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
ADAM172475NM_003183.6AR
EPCAM945NM_002354.3AR
FOXP31296NM_014009.4XL
GUCY2C3222NM_004963.4AD
IL10RA1737NM_001558.4AR
IL10RB978NM_000628.5AR
MEFV2346NM_000243.3AD, AR
NLRC43075NM_021209.4AD
SAMD94770NM_001193307.2AD
SKIC23741NM_006929.5AR
SKIC34695NM_014639.4AR
STAT12253NM_007315.4AD, AR
TTC7A2577NM_020458.4AR
ADA1092NM_000022.4AR
AICDA597NM_020661.4AR
ANO13232NM_018043.6AR
BTK1980NM_000061.3XL
CD3G549NM_000073.3AR
CD40LG786NM_000074.3XLR
COL7A18835NM_000094.4AR
CTLA4525NM_001037631.3AD
CYBA588NM_000101.4AR
CYBB1713NM_000397.4XL
CYBC1673AR
DCLRE1C2079NM_001033855.3AR
DKC11545NM_001363.5XLR
DOCK86300NM_203447.4AR
FERMT12034NM_017671.5AR
G6PC31041NM_138387.4AR
HPS12103NM_000195.5AR
HPS42127NM_022081.6AR
HPS62328NM_024747.6AR
ICOS600NM_012092.4AR
IL10537NM_000572.3AR
IL21462NM_001207006.3AR
IL2RA819NM_000417.3AR
IL2RG1110NM_000206.3XL
ITGB22310NM_000211.5AR
LIG42736NM_002312.3AR
LRBA8556NM_001199282.2AR
MVK1191NM_000431.4AR
NCF11173NM_000265.6AR
NCF21581NM_000433.4AR
NCF41020NM_000631.5AR
NPC13837NM_000271.5AR
OTULIN1066NM_138348.6AR
PIK3CD3135NM_005026.5AR
PIK3R12175NM_181523.3AD, AR
PLCG23798NM_002661.5AD
PTEN1212NM_000314.8AD
RAG13132NM_000448.3AR
RAG21584NM_000536.4AR
RTEL13732NM_032957.5AR
SH2D1A378NM_001114937.3XL
SLC37A41291NM_001164277.2AR
STAT32313NM_139276.3AD
STXBP21773NM_006949.4AR
TGFBR11512NM_004612.4AD
TGFBR21704NM_003242.6AD
WAS1509NM_000377.3XL
XIAP1494NM_001167.4XL
ZAP701860NM_001079.4AR

Informations about the disease

Clinical Comment

illness_ClinicalComment_EP3392

 

Synonyms
  • Allelic: Diabetes mellitus, insulin-dependent, 12 (CTLA4)
  • Allelic: Diabetes, mellitus, insulin-dependent, susceptibility to, 10 (IL2RA)
  • Allelic: Dursun syndrome (G6PC3)
  • Allelic: Dysmorphic features [panelapp] (ANO1)
  • Allelic: Epidermolysis bullosa, pretibial (COL7A1)
  • Allelic: Esophageal cancer, somatic (TGFBR2)
  • Allelic: Familial cold autoinflammatory syndrome 3 (PLCG2)
  • Allelic: Familial cold autoinflammatory syndrome 4 (NLRC4)
  • Allelic: Glioma susceptibility 2 (PTEN)
  • Allelic: Graft-versus-host disease, protection against (IL10)
  • Allelic: HIV-1, susceptibility to (IL10)
  • Allelic: Hashimoto thyroiditis (CTLA4)
  • Allelic: Hepatitis B virus, susceptibility to (IL10RB)
  • Allelic: Incontinentia pigmenti (IKBKG)
  • Allelic: Macrocephaly/autism syndrome (PTEN)
  • Allelic: Meconium ileus (GUCY2C)
  • Allelic: Meningioma (PTEN)
  • Allelic: Mevalonic aciduria (MVK)
  • Allelic: Monosomy 7 myelodysplasia + leukemia syndrome 2 (SAMD9)
  • Allelic: Multiple myeloma, resistance to (LIG4)
  • Allelic: Multiple self-healing squamous epithelioma, susceptibility to (TGFBR1)
  • Allelic: Neutrophilic dermatosis, acute febrile (MEFV)
  • Allelic: Omenn syndrome (DCLRE1C, RAG1, RAG2)
  • Allelic: Porokeratosis 3, multiple types (MVK)
  • Allelic: Prostate cancer, somatic (PTEN)
  • Allelic: Pulmonary fibrosis and/or bone marrow failure, telomere-related, 3 (RTEL1)
  • Allelic: Rheumatoid arthritis, progression of (IL10)
  • Allelic: SHORT syndrome (PIK3R1)
  • Allelic: Systemic lupus erythematosus, susceptibility to (CTLA4)
  • Allelic: Thrombocytopenia, XL (WAS)
  • Allelic: Thrombocytopenia, XL, intermittent (WAS)
  • Allelic: Toenail dystrophy, isolated (COL7A1)
  • Allelic: Transient bullous of the newborn (COL7A1))
  • Allelic: Tumoral calcinosis, familial, normophosphatemic (SAMD9)
  • Adenosine deaminase deficiency, partial (ADA)
  • Agammaglobulinemia 7, AR (PIK3R1)
  • Agammaglobulinemia, XL 1 (BTK)
  • Allelic: Polymicrogyria, perisylvian, with cerebellar hypoplasia + arthrogryposis (PI4KA)
  • Allelic: Spastic paraplegia 84, AR (PI4KA)
  • Alpha/beta T-cell lymphopenia, g/d T-cell exp., severe cytomegalov. infection, autoimmunity (RAG1)
  • Autoimmune disease, multisystem, infantile-onset, 1 (STAT3)
  • Autoimmune disease, multisystem, infantile-onset, 2 (ZAP70)
  • Autoimmune lymphoproliferative syndrome, type V (CTLA4)
  • Autoinflammation with infantile enterocolitis (NLRC4)
  • Autoinflammation, antibody deficiency, immune dysregulation syndrome (PPLCG2)
  • Autoinflammation, panniculitis + dermatosis syndrome (OTULIN)
  • Celiac disease, susceptibility to, 3 (CTLA4)
  • Chronic granulomatous disease 1, AR (NFC1)
  • Chronic granulomatous disease 2, AR (NFC2)
  • Chronic granulomatous disease 4, AR (CYBA)
  • Chronic granulomatous disease 5, AR (CYBC1 syn. C17orf62)
  • Chronic granulomatous disease, XL (CYBB)
  • Colorectal cancer, hereditary nonpolyposis, type 6 (TGFBR2)
  • Colorectal cancer, hereditary nonpolyposis, type 8 (EPCAM)
  • Combined cellular + humoral immune defects with granulomas (RAG1, RAG2)
  • Combined immunodeficiency, XL, moderate (IL2RG)
  • Cowden syndrome 1 (PTEN)
  • Diarrhea 5, with tufting enteropathy, congenital (EPCAM)
  • Diarrhea 6 (GUCY2C)
  • Dyskeratosis congenita, AD 4 (RTEL1)
  • Dyskeratosis congenita, AR 5 (RTEL1)
  • Dyskeratosis congenita, XL (DKC1)
  • Ectodermal dysplasia + immunodeficiency 1 (IKBKG)
  • Epidermolysis bullosa dystrophica inversa (COL7A1)
  • Epidermolysis bullosa dystrophica, AD + AR (COL7A1)
  • Epidermolysis bullosa dystrophica, Bart type (COL7A1)
  • Epidermolysis bullosa dystrophica, localisata variant (COL7A1)
  • Epidermolysis bullosa pruriginosa (COL7A1)
  • Familial Mediterranean fever, AD + AR (MEFV)
  • Gastrointestinal defects + immunodeficiency syndrome (TTC7A)
  • Gastrointestinal defects + immunodeficiency syndrome 2 (PI4KA)
  • Glycogen storage disease Ib + Ic (SLC37A4)
  • Haemorrhagic diarrhoea [panelapp] (ANO1)
  • Hemophagocytic lymphohistiocytosis, familial, 5 (STXBP2)
  • Hermansky-Pudlak syndrome 1 (HPS1)
  • Hermansky-Pudlak syndrome 4 (HPS4)
  • Hermansky-Pudlak syndrome 6 (HPS6)
  • Hyper-IgD syndrome (MVK)
  • Hyper-IgE recurrent infection syndrom (STAT3)
  • Hyper-IgE recurrent infection syndrome, AR (DOCK8)
  • Immunodeficiency 14 (PIK3CD)
  • Immunodeficiency 17, CD3 gamma deficient (CD3G)
  • Immunodeficiency 31A, mycobacteriosis, AD (STAT1)
  • Immunodeficiency 31B, mycobacterial + viral infections, AR (STAT1)
  • Immunodeficiency 31C, chronic mucocutaneous candidiasis, AD (STAT1)
  • Immunodeficiency 33 (IKBKG)
  • Immunodeficiency 34, mycobacteriosis, XL (CYBB)
  • Immunodeficiency 36 (PIK3R1)
  • Immunodeficiency 41 with lymphoproliferation + autoimmunity (IL2RA)
  • Immunodeficiency 48 (ZAP70)
  • Immunodeficiency with hyper-IgM, type 2 (AICCDA)
  • Immunodeficiency, XL, with hyper-IgM (CD40LG)
  • Immunodeficiency, common variable, 1 (ICOS)
  • Immunodeficiency, common variable, 11 (IL21)
  • Immunodeficiency, common variable, 8, with autoimmunity (LSBA)
  • Immunodysregulation, polyendocrinopathy + enteropathy, XL (FOXP3)
  • Impaired intestinal peristalsis [panelapp] (ANO1)
  • Inflammatory bowel disease 25, early onset, AR (IL10RB)
  • Inflammatory bowel disease 28, early onset, AR (IL10RA)
  • Inflammatory skin + bowel disease, neonatal, 1 (ADAM17)
  • Isolated growth hormone deficiency, type III, with agammaglobulinemia (BTK)
  • Kindler syndrome (FERMT1)
  • LIG4 syndrome (LIG4)
  • Leukocyte adhesion deficiency (ITGB2)
  • Lhermitte-Duclos syndrome (PTEN)
  • Loeys-Dietz syndrome 1 (TGFBR1)
  • Loeys-Dietz syndrome 2 (TGFBR2)
  • Lymphoproliferative syndrome, XL, 1 (Sh2D1A)
  • Lymphoproliferative syndrome, XL, 2 (XIAP)
  • MIRAGE syndrome (SAMD9)
  • Neutropenia, severe congenital 4, AR (G6PC3)
  • Neutropenia, severe congenital, XL (WAS)
  • Niemann-Pick disease, type C1 + D (NPC1)
  • Severe combined immunodeficiency due to ADA deficiency (ADA)
  • Severe combined immunodeficiency, Athabascan type (DCLRE1C)
  • Severe combined immunodeficiency, B cell-negative (RAG1, RAG2)
  • Severe combined immunodeficiency, XL (IL2RG)
  • Trichohepatoenteric syndrome 1 (TTC37)
  • Trichohepatoenteric syndrome 2 (SKIV2L)
  • Wiskott-Aldrich syndrome (WAS)
Heredity, heredity patterns etc.
  • AD
  • AR
  • XL
  • XLR
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

No text defined