IllnessGastroenterologic epithelial barrier disorders
Summary
Short information
Comprehensive differential diagnostic panel for gastroenterologic epithelial barrier disorders comprising 23 or 56 curated genes according to the clinical signs
ID
GP3039
Number of genes
53
Accredited laboratory test
Examined sequence length
29,0 kb (Core-/Core-canditate-Genes)
125,7 kb (Extended panel: incl. additional genes)
125,7 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Test material
- EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications
NGS +
Gene panel
Selected genes
Name | Exon Length (bp) | OMIM-G | Referenz-Seq. | Heredity |
---|---|---|---|---|
CD40LG | 786 | NM_000074.3 | XLR | |
CTLA4 | 525 | NM_001037631.3 | AD | |
CYBA | 588 | NM_000101.4 | AR | |
CYBB | 1713 | NM_000397.4 | XLR | |
DCLRE1C | 2079 | NM_001033855.3 | AR | |
EPCAM | 945 | NM_002354.3 | AR | |
FOXP3 | 1296 | NM_014009.4 | XLR | |
ICOS | 600 | NM_012092.4 | AR | |
IL10 | 537 | NM_000572.3 | AR | |
IL10RA | 1737 | NM_001558.4 | AR | |
IL10RB | 978 | NM_000628.5 | AR | |
IL2RA | 819 | NM_000417.3 | AR | |
IL2RG | 1110 | NM_000206.3 | XLR | |
MVK | 1191 | NM_000431.4 | AR | |
NCF1 | 1173 | NM_000265.6 | AR | |
RAG2 | 1584 | NM_000536.4 | AR | |
SH2D1A | 378 | NM_001114937.3 | XL | |
SLC37A4 | 1291 | NM_001164277.2 | AR | |
STAT3 | 2313 | NM_139276.3 | AD | |
STXBP2 | 1773 | NM_006949.4 | AR | |
TTC7A | 2577 | NM_020458.4 | AR | |
WAS | 1509 | NM_000377.3 | XL | |
XIAP | 1494 | NM_001167.4 | XL | |
ADA | 1092 | NM_000022.4 | AR | |
ADAM17 | 2475 | NM_003183.6 | AR | |
COL7A1 | 8835 | NM_000094.4 | AR | |
DOCK8 | 6300 | NM_203447.4 | AR | |
FERMT1 | 2034 | NM_017671.5 | AR | |
GUCY2C | 3222 | NM_004963.4 | AD, AR | |
HPS1 | 2103 | NM_000195.5 | AR | |
HPS4 | 2127 | NM_022081.6 | AR | |
HPS6 | 2328 | NM_024747.6 | AR | |
ITGB2 | 2310 | NM_000211.5 | AR | |
LIG4 | 2736 | NM_002312.3 | AR | |
LRBA | 8556 | NM_001199282.2 | AR | |
MEFV | 2346 | NM_000243.3 | AD, AR | |
MYO5B | 5547 | NM_001080467.3 | AR | |
NCF2 | 1581 | NM_000433.4 | AR | |
NCF4 | 1020 | NM_000631.5 | AR | |
NOD2 | 3123 | NM_022162.3 | AD | |
OTULIN | 1066 | NM_138348.6 | AR | |
PIK3CD | 3135 | NM_005026.5 | AR | |
PIK3R1 | 2175 | NM_181523.3 | AD, AR | |
PLCG2 | 3798 | NM_002661.5 | AD | |
PTEN | 1212 | NM_000314.8 | AD | |
RAG1 | 3132 | NM_000448.3 | AR | |
RET | 3345 | NM_020975.6 | AD, AR | |
RTEL1 | 3732 | NM_032957.5 | AD, AR | |
SAMD9 | 4770 | NM_001193307.2 | AD | |
SKIC2 | 3741 | NM_006929.5 | AR | |
SKIC3 | 4695 | NM_014639.4 | AR | |
STAT1 | 2253 | NM_007315.4 | AD, AR | |
ZAP70 | 1860 | NM_001079.4 | AR |
Informations about the disease
Synonyms
- Allelic: Autoimmune lymphoproliferative syndrome, type V (CTLA4)
- Allelic: Central hypoventilation syndrome, congenital (RET)
- Allelic: Colorectal cancer, hereditary nonpolyposis, type 8 (EPCAM)
- Allelic: Diabetes mellitus, insulin-dependent, 12 (CTLA4)
- Allelic: Diabetes, mellitus, insulin-dependent, susceptibility to, 10 (IL2RA)
- Allelic: Epidermolysis bullosa pruriginosa (COL7A1)
- Allelic: Epidermolysis bullosa, pretibial (COL7A1)
- Allelic: Glioma susceptibility 2 (PTEN)
- Allelic: Graft-versus-host disease, protection against (IL10)
- Allelic: HIV-1, susceptibility to (IL10)
- Allelic: Hashimoto thyroiditis (CTLA4)
- Allelic: Hepatitis B virus, susceptibility to (IL10RB)
- Allelic: Macrocephaly/autism syndrome (PTEN)
- Allelic: Medullary thyroid carcinoma (RET)
- Allelic: Meningioma (PTEN)
- Allelic: Monosomy 7 myelodysplasia + leukemia syndrome 2 (SAMD9)
- Allelic: Multiple endocrine neoplasia IIA (RET)
- Allelic: Multiple endocrine neoplasia IIB (RET)
- Allelic: Multiple myeloma, resistance to (LIG4)
- Allelic: Neutrophilic dermatosis, acute febrile (MEFV)
- Allelic: Pheochromocytoma (RET)
- Allelic: Porokeratosis 3, multiple types (MVK)
- Allelic: Prostate cancer, somatic (PTEN)
- Allelic: Rheumatoid arthritis, progression of (IL10)
- Allelic: Severe combined immunodeficiency due to ADA deficiency (ADA)
- Allelic: Thrombocytopenia, XL (WAS)
- Allelic: Thrombocytopenia, XL, intermittent (WAS)
- Allelic: Toenail dystrophy, isolated (COL7A1)
- Allelic: Transient bullous of the newborn (COL7A1)
- Adenosine deaminase deficiency, partial (ADA)
- Allelic: Tumoral calcinosis, familial, normophosphatemic (SAMD9)
- Alpha/beta T-cell lymphopenia, g/d T-cell expansion, severe cytomegalov. inf. + autoimmunity (RAG1)
- Autoimmune disease, multisystem, infantile-onset, 1 (STAT3(
- Autoimmune disease, multisystem, infantile-onset, 2 (ZAP70)
- Autoinflammation, antibody deficiency + immune dysregulation syndrome (PLCG2)
- Autoinflammation, panniculitis + dermatosis syndrome (OTULIN)
- Blau syndrome (NOD2)
- Celiac disease, susceptibility to, 3 (CTLA4)
- Chronic granulomatous disease 1, AR (NCF1)
- Chronic granulomatous disease 2, AR (NCF2)
- Chronic granulomatous disease 3, AR (NCF4)
- Chronic granulomatous disease 4, AR (CYBA)
- Chronic granulomatous disease, XL (CYBB)
- Combined cellular + humoral immune defects with granulomas (RAG1, RAG2)
- Combined immunodeficiency, XL, moderate (IL2RG)
- Cowden syndrome 1 (PTEN)
- Diarrhea 5, with tufting enteropathy, congenital (EPCAM)
- Diarrhea 6 (GUCY2C)
- Dyskeratosis congenita, AD 4 (RTEL1)
- Dyskeratosis congenita, AR 5 (RTEL1)
- Ectodermal dysplasia + immunodeficiency 1 (IKBKG)
- Epidermolysis bullosa dystrophica inversa (COL7A1)
- Epidermolysis bullosa dystrophica, AD (COL7A1)
- Epidermolysis bullosa dystrophica, AR (COL7A1)
- Epidermolysis bullosa dystrophica, Bart type (COl7A1)
- Epidermolysis bullosa dystrophica, localisata variant (COL7A1)
- Familial Mediterranean fever, AD (MEFV)
- Familial Mediterranean fever, AR (MEFV)
- Familial cold autoinflammatory syndrome 3 (PLCG2)
- Gastrointestinal defects and immunodeficiency syndrome (TTC7A)
- Glycogen storage disease IB + Ic (SLC37A4)
- Hemophagocytic lymphohistiocytosis, familial, 5 (STXBP2)
- Hermansky-Pudlak syndrome 1 (HPS1)
- Hermansky-Pudlak syndrome 4 (HPS4)
- Hermansky-Pudlak syndrome 6 (HPS6)
- Hirschsprung disease, protection against (RET)
- Hirschsprung disease, susceptibility to, 1 (RET)
- Hyper-IgD syndrome (MVK)
- Hyper-IgE recurrent infection syndrome (STAT3)
- Hyper-IgE recurrent infection syndrome, AR (DOCK8)
- Immunodeficiency 14 (PIK3CD)
- Immunodeficiency 31A, mycobacteriosis, AD (STAT1)
- Immunodeficiency 31B, mycobacterial and viral infections, AR (STAT1)
- Immunodeficiency 31C, chronic mucocutaneous candidiasis, AD (STAT1)
- Immunodeficiency 33 (IKBKG)
- Immunodeficiency 34, mycobacteriosis, XL (CYBB)
- Immunodeficiency 41 with lymphoproliferation + autoimmunity (IL2RA)
- Immunodeficiency 48 (ZAP70)
- Immunodeficiency, XL, with hyper-IgM (CD40LG)
- Immunodeficiency, common variable, 1 (ICOS)
- Immunodeficiency, common variable, 8, with autoimmunity (LRBA)
- Immunodysregulation, polyendocrinopathy + enteropathy, XL (FOXP3)
- Incontinentia pigmenti (IKBKG)
- Inflammatory bowel disease 1, Crohn disease (NOD2)
- Inflammatory bowel disease 25, early onset, AR (IL10RB)
- Inflammatory bowel disease 28, early onset, AR (IL10RA)
- Inflammatory skin + bowel disease, neonatal, 1 (ADAM17)
- Intestinal dysmotility syndrome (ANO1)
- Kindler syndrome (FERMT1)
- LIG4 syndrome (LIG4)
- Leukocyte adhesion deficiency (ITGB2)
- Lhermitte-Duclos syndrome (PTEN)
- Lymphoproliferative syndrome, XL, 1 (SH2D1A)
- Lymphoproliferative syndrome, XL, 2 (XIAP)
- MIRAGE syndrome (SAMD9)
- Meconium ileus (GUCY2C)
- Mevalonic aciduria (MVK)
- Microvillus inclusion disease (MYO5B)
- Neutropenia, severe congenital, X (WAS)
- Omenn syndrome (DCLRE1C, RAG1, RAG2)
- Pulmonary fibrosis and/or bone marrow failure, telomere-related, 3 (RTEL1)
- Severe combined immunodeficiency, Athabascan type (DCLRE1C)
- Severe combined immunodeficiency, B cell-negative (RAG1, RAG2)
- Severe combined immunodeficiency, XL (IL2RG)
- Systemic lupus erythematosus, susceptibility to (CTLA4)
- Trichohepatoenteric syndrome 1 (TTC37)
- Trichohepatoenteric syndrome 2 (SKIC2L)
- Wiskott-Aldrich syndrome (WAS)
- Yao syndrome (NOD2)
Heredity, heredity patterns etc.
- AD
- AR
- XL
- XLR
OMIM-Ps
- Multiple OMIM-Ps
ICD10 Code
Bioinformatics and clinical interpretation
No text defined