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Interdisciplinary CompetenceMolecular Diagnostics
Know how in the analysis of genetic material.
For the benefit of patients.

IllnessKleinwuchs, frühe Kindheit; Differentialdiagnose

Summary

Short information

KP6431_KI

ID
KP6431
Number of loci
Loci typeCount
Gen50
Accredited laboratory test
Examined sequence length
14,3 kb (Core-/Core-canditate-Genes)
135,8 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Test material
  • EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications

NGS +

[Sanger]

 

Loci panel

Gen

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
ACAN7593NM_013227.4AD, AR
GH1654NM_000515.5AD, AR
IGF1462NM_000618.5AR
IGF1R4104NM_000875.5AD, AR
IGF2543NM_000612.6AD
SHOX879NM_000451.4, NM_006883.2PD/PR
ANKRD117992NM_013275.6AD
BLM4254NM_000057.4AR
BRAF2301NM_004333.6AD
BRIP13750NM_032043.3AR
CBL2721NM_005188.4AD
CCDC81617NM_032040.5AR
CDKN1C951NM_000076.2AD
CUL75097NM_014780.5AR
ERCC42751NM_005236.3AR
FANCA4368NM_000135.4AR
FANCB2580NM_001018113.3XL
FANCC1677NM_000136.3AR
FANCE1611NM_021922.3AR
FANCF1125NM_022725.4AR
FANCG1869NM_004629.2AR
FANCI3987NM_001113378.2AR
FANCL1128NM_018062.4AR
FGFR32421NM_000142.5AD
HMGA2330NM_003483.6AD
HRAS570NM_005343.4AD
KRAS567NM_004985.5AD
LZTR12523NM_006767.4AD, AR
MAP2K11182NM_002755.4AD
MAP2K21203NM_030662.4AD
NBN2265NM_002485.5AR
NF18457NM_001042492.3AD
NRAS570NM_002524.5AD
OBSL15691NM_015311.3AR
PALB23561NM_024675.4AR
PIK3R12175NM_181523.3AD
PLAG11503NM_002655.3AD
PPP1CB350NM_002709.3AD
PTPN111782NM_002834.5AD
RAF11947NM_002880.4AD
RASA22550NM_006506.5AD
RIT1660NM_006912.6AD
SHOC21749NM_007373.4AD
SLX45505NM_032444.4AR
SOS14002NM_005633.4AD
SOS23999NM_006939.4AD
SRCAP9693NM_006662.3AD
TOP3A3006NM_004618.5AR
TRIM372895NM_015294.6AR
UBE2T594NM_014176.4AR

Informations about the disease

Clinical Comment

Group of heterogenous dieases: Short stature, optimally defined relative to the genetic endowment of the individual, is recognized by comparing an individual’s height with that of a large population of a similar genetic background, more particularly, using the mid-parental target height

 

Synonyms
  • Alias: Short stature, early infantile
  • Allelic: Adenocarcinoma of lung, somatic (BRAF)
  • Allelic: Adenomas, salivary gland pleomorphic, somatic (PLAG1)
  • Allelic: Agammaglobulinemia 7, AR (PIK3R1)
  • Allelic: Agammaglobulinemia, XL 1 (BTK)
  • Allelic: Aplastic anemia (NBN)
  • Allelic: Arteriovenous malformation of the brain, somatic (KRAS)
  • Allelic: Beckwith-Wiedemann syndrome (CDKN1C)
  • Allelic: Bladder cancer, somatic (FGFR3)
  • Allelic: Bladder cancer, somatic (HRAS)
  • Allelic: Bladder cancer, somatic (KRAS)
  • Allelic: Breast cancer, early-onset, susceptibility to (BRIP1)
  • Allelic: Breast cancer, male, susceptibility to (BRCA2)
  • Allelic: Breast cancer, somatic (KRAS)
  • Allelic: Breast cancer, susceptibility to (PALB2)
  • Allelic: Breast cancer, susceptibility to (RAD51)
  • Allelic: Breast-ovarian cancer, familial, 2 (BRCA2)
  • Allelic: CATSHL syndrome (FGFR3)
  • Allelic: Cardiofaciocutaneous syndrome (BRAF)
  • Allelic: Cardiofaciocutaneous syndrome 2 (KRAS)
  • Allelic: Cardiomyopathy, dilated, 1NN (RAF1)
  • Allelic: Cervical cancer, somatic (FGFR3)
  • Allelic: Colorectal cancer, somatic (BRAF)
  • Allelic: Colorectal cancer, somatic (FGFR3)
  • Allelic: Colorectal cancer, somatic (NRAS)
  • Allelic: Congenital myopathy with excess of muscle spindles (HRAS)
  • Allelic: Crouzon syndrome with acanthosis nigricans (FGFR3)
  • Allelic: Epidermal nevus, somatic (NRAS)
  • Allelic: Fibromatosis, gingival, 1 (SOS1)
  • Allelic: Gastric cancer, somatic (KRAS)
  • Allelic: Glioblastoma 3 (BRCA2)
  • Allelic: Hypercholesterolemia, familial, modifier of (GHR)
  • Allelic: Immunodeficiency 36 (PIK3R1)
  • Allelic: Increased responsiveness to growth hormone (GHR)
  • Allelic: Juvenile myelomonocytic leukemia (CBL)
  • Allelic: LADD syndrome (FGFR3)
  • Allelic: Leukemia, acute lymphoblastic (NBN)
  • Allelic: Leukemia, acute myeloid, somatic (KRAS)
  • Allelic: Leukemia, juvenile myelomonocytic (NF1)
  • Allelic: Leukemia, juvenile myelomonocytic, somatic (PTPN11)
  • Allelic: Lung cancer, somatic (KRAS)
  • Allelic: Medulloblastoma (BRCA2)
  • Allelic: Melanocytic nevus syndrome, congenital, somatic (NRAS)
  • Allelic: Melanoma, malignant, somatic (BRAF)
  • Allelic: Melorheostosis, isolated, somatic mosaic (MAP2K1)
  • Allelic: Metachondromatosis (PTPN11)
  • Allelic: Mirror movements 2 (RAD51)
  • Allelic: Muenke syndrome (FGFR3)
  • Allelic: Neurocutaneous melanosis, somatic (NRAS)
  • Allelic: Nevus sebaceous or woolly hair nevus, somatic (HRAS)
  • Allelic: Nevus, epidermal, somatic (FGFR3)
  • Allelic: Nonsmall cell lung cancer, somatic (BRAF)
  • Allelic: Oculoectodermal syndrome, somatic (KRAS)
  • Allelic: Ovarian carcinoma (RRAS2)
  • Allelic: Pancreatic cancer 2 (BRCA2)
  • Allelic: Pancreatic cancer, susceptibility to, 3 (PALB2)
  • Allelic: Pancreatic carcinoma, somatic (KRAS)
  • Allelic: Progressive external ophthalmoplegia with mitoch. DNA deletions, AR 5 (TOP3A)
  • Allelic: Prostate cancer (BRCA2)
  • Allelic: RAS-associated autoimmune leukoproliferative disorder (KRAS)
  • Allelic: RAS-associated autoimmune lymphoproliferative syndrome type IV, somatic (NRAS)
  • Allelic: Schimmelpenning-Feuerstein-Mims syndrome, somatic mosaic (HRAS)
  • Allelic: Schimmelpenning-Feuerstein-Mims syndrome, somatic mosaic (KRAS)
  • Allelic: Schimmelpenning-Feuerstein-Mims syndrome, somatic mosaic (NRAS)
  • Allelic: Schwannomatosis-2, susceptibility to (LZTR1)
  • Allelic: Spermatocytic seminoma, somatic (FGFR3)
  • Allelic: Spitz nevus or nevus spilus, somatic (HRAS)
  • Allelic: Thyroid carcinoma, follicular, somatic (HRAS)
  • Allelic: Thyroid carcinoma, follicular, somatic (NRAS)
  • Allelic: Watson syndrome (NF1)
  • Allelic: Wilms tumor (BRCA2)
  • Allelic: Xeroderma pigmentosum, group F (ERCC4)
  • Allelic: Xeroderma pigmentosum, type F/Cockayne syndrome (ERCC4)
  • 3-M syndrome 1 (CUL7)
  • 3-M syndrome 2 (OBSL1)
  • 3-M syndrome 3 (CCDC8)
  • Achondroplasia (FGFR3)
  • Acid-labile subunit, deficiency of (IGFALS)
  • Acromesomelic dysplasia 1, Maroteaux type (NPR2)
  • Beckwith-Wiedemann syndrome (CDKN1C)
  • Bloom syndrome (BLM)
  • Cardiofaciocutaneous syndrome 3 (MAP2K1)
  • Cardiofaciocutaneous syndrome 4 (MAP2K2)
  • Congenital disorder of glycosylation, type IIj (COG4)
  • Costello syndrome (HRAS)
  • DNA damage repair defect [panelapp] (ZNF668)
  • Diabetes mellitus, transient neonatal 1 (ZFP57)
  • Diets-Jongmans syndrome (KDM3B)
  • Epiphyseal chondrodysplasia, Miura type (NPR2)
  • FINCA [FIbrosis, Neurodegeneration + Cerebral Angiomatosis] syndrome (NHLRC2)
  • Failure to thrive + developmental delay [panelapp] (CCDC186)
  • Fanconi anemia, complementation group A (FANCA)
  • Fanconi anemia, complementation group B (FANCB)
  • Fanconi anemia, complementation group C (FANCC)
  • Fanconi anemia, complementation group D1 (BRCA2)
  • Fanconi anemia, complementation group D2 (FANCD2)
  • Fanconi anemia, complementation group E (FANCE)
  • Fanconi anemia, complementation group F (FANCF)
  • Fanconi anemia, complementation group G (FANCG)
  • Fanconi anemia, complementation group I (FANCI)
  • Fanconi anemia, complementation group J (BRIP1)
  • Fanconi anemia, complementation group L (FANCL)
  • Fanconi anemia, complementation group N (PALB2)
  • Fanconi anemia, complementation group P (SLX4)
  • Fanconi anemia, complementation group Q (ERCC4)
  • Fanconi anemia, complementation group R (RAD51)
  • Fanconi anemia, complementation group T (UBE2T)
  • Floating-Harbor syndrome (SRCAP)
  • Growth hormone deficiency, isolated, types IA, IB, II (GH1)
  • Growth hormone insensitivity with immune dysregulation 1, AR (STAT5B)
  • Growth hormone insensitivity with immune dysregulation 2, AD (STAT5B)
  • Growth hormone insensitivity, partial (GHR)
  • Growth retardation with deafness + mental retardation due to IGF1 deficiency (IGF1)
  • Hydatidiform mole, recurrent, 1 (NLRP7)
  • Hypochondroplasia (FGFR3)
  • IMAGE syndrome (CDKN1C)
  • Infantile liver failure syndrome 2 (NBAS)
  • Insulin-like growth factor I, resistance to (IGF1R)
  • Intellectual developmental disorder, AD 23 (SETD5)
  • Isolated growth hormone deficiency, type III, with agammaglobulinemia (BTK)
  • KBG syndrome (ANKRD11)
  • Kowarski syndrome (GH1))
  • LEOPARD syndrome 1 (PTPN11)
  • LEOPARD syndrome 2 (RAF1)
  • LEOPARD syndrome 3 (BRAF)
  • Langer mesomelic dysplasia (SHOX)
  • Laron dwarfism (GHR)
  • Leri-Weill dyschondrosteosis (SHOX)
  • Mandibuloacral dysplasia progeroid syndrome (MTX2)
  • Microcephaly + chorioretinopathy, AR, 2 (PLK4)
  • Microcephaly, growth deficiency, development delay, brain malform., face dysmor. [panelapp] (ZNF668)
  • Microcephaly, growth restriction, increased sister chromatid exchange 2 (TOP3A)
  • Mosaic variegated aneuploidy syndrome 2 (CEP57)
  • Mulibrey nanism (TRIM37)
  • Multiple congenital abnormalities [panelapp] (FOXP4)
  • Muscular dystrophy, congenital hearing loss + ovarian insufficiency syndrome (GGPS1)
  • Myopathy, mitochondrial + ataxia (MSTO1)
  • Neurodevelopmental disorder [panelapp] (FOXP4)
  • Neurodevelopmental disorder with cataracts, poor growth + dysmorphic facies (INTS1)
  • Neurodevelopmental disorder with microcephaly, seizures, neonatal cholestasis (VPS50)
  • Neurofibromatosis, familial spinal (NF1)
  • Neurofibromatosis, type 1 (NF1)
  • Neurofibromatosis-Noonan syndrome (NF1)
  • Nijmegen breakage syndrome (NBN)
  • Noonan syndrome 1 (PTPN11)
  • Noonan syndrome 10 (LZTR1)
  • Noonan syndrome 11 (MRAS)
  • Noonan syndrome 12 (RRAS2)
  • Noonan syndrome 13 (MAPK1)
  • Noonan syndrome 14 (SPRED2)
  • Noonan syndrome 2 (LZTR1)
  • Noonan syndrome 3 (KRAS)
  • Noonan syndrome 4 (SOS1)
  • Noonan syndrome 5 (RAF1)
  • Noonan syndrome 6 (NRAS)
  • Noonan syndrome 7 (BRAF)
  • Noonan syndrome 8 (RIT1)
  • Noonan syndrome 9 (SOS2)
  • Noonan syndrome [panelapp] (RASA2)
  • Noonan syndrome-like disorder with loose anagen hair 2 (PPP1CB)
  • Noonan syndrome-like disorder with/-out juvenile myelomonocytic leukemia (CBL)
  • Noonan syndrome-like with loose anagen hair 1 (SHOC2)
  • Pituitary hormone deficiency, combined or isolated, 7 (RNPC3)
  • Preimplantation embryonic lethality 2 (PADI6)
  • Rothmund-Thomson syndrome, type 1 (ANAPC1)
  • SADDAN (FGFR3)
  • SHORT syndrome (PIK3R1)
  • Saul-Wilson syndrome (COG4)
  • Short stature with nonspecific skeletal abnormalities (NPR2)
  • Short stature, advanced bone age, with/-out early-onset osteoarthr. and/or osteochondr. diss. (ACAN)
  • Short stature, idiopathic familial (SHOX)
  • Short stature, optic nerve atrophy + Pelger-Huet anomaly (NBAS)
  • Silver-Russell syndrome 3 (IGF2)
  • Silver-Russell syndrome 4 (PLAG1)
  • Silver-Russell syndrome 5 (HMGA2)
  • Spondyloepimetaphyseal dysplasia, aggrecan type (ACAN)
  • Spondyloepiphyseal dysplasia, Kimberley type (ACAN)
  • Syndromic intellectual disability, short stature [panelapp] (RAP1B)
  • Thanatophoric dysplasia, type I + II (FGFR3)
  • XFE progeroid syndrome (ERCC4)
Heredity, heredity patterns etc.
  • AD
  • AR
  • PD/PR
  • XL
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

Test-Stärken

  • DAkkS-akkreditiertes Labor
  • EU-Richtlinie für IVD in Umsetzung
  • Qualitäts-kontrolliert arbeitendes Personal
  • Leistungsstarke Sequenzierungstechnologien, fortschrittliche Target-Anreicherungsmethoden und Präzisions-Bioinformatik-Pipelines sorgen für überragende analytische Leistung
  • Sorgfältige Kuratierung klinisch relevanter und wissenschaftlich begründeter Gen-Panels
  • eine Vielzahl nicht Protein-kodierender Varianten, die in unseren klinischen NGS-Tests mit erfasst werden
  • unser strenges Variantenklassifizierungsschema nach ACMG-Kriterien
  • unser systematischer klinischer Interpretations-Workflow mit proprietärer Software ermöglicht die genaue und nachvollziehbare Verarbeitung von NGS-Daten
  • unsere umfassenden klinischen Aussagen

Testeinschränkungen

  • Gene mit eingeschränkter Abdeckung werden gekennzeichnet
  • Gene mit kompletten oder partiellen Duplikationen werden gekennzeichnet
  • es wird angenommen, dass ein Gen suboptimal abgedeckt ist, wenn >90% der Nukleotide des Gens bei einem Mapping-Qualitätsfaktor von >20 (MQ>20) nicht abgedeckt sind
  • die Sensitivität der Diagnostik zur Erkennung von Varianten mit genannten Testeinschränkungen ist möglicherweise begrenzt bei:
  • Gen-Konversionen
  • komplexe Inversionen
  • Balancierte Translokationen
  • Mitochondriale Varianten
  • Repeat-Expansionen, sofern nicht anders dokumentiert
  • nicht kodierende Varianten, die Krankheiten verursachen, die von diesem Panel nicht mit abgedeckt werden
  • niedriger Mosaik-Status
  • Repeat-Blöcke von Mononukleotiden
  • Indels >50bp (Insertionen-Deletionen)
  • Deletionen oder Duplikationen einzelner Exons
  • Varianten innerhalb von Pseudogenen
  • die analytische Sensitivität kann geringer ausfallen werden, wenn die DNA nicht von amedes genetics extrahiert wurde

Laboratory requirement

  • Die in grün gezeigten Gene sind kuratiert und werden als Gen-Panel untersucht. Eine Erweiterung des Panels (blau gezeigte Gene, jeweils ebenfalls kuratiert) kann auf Anfrage erfolgen. Sofern unter "Erweitertes Panel" ein Minuszeichen angezeigt wird, sind nur Core-/Basis-Gene verfügbar.

  • Für die Anforderung einer genetischen Untersuchung senden Sie uns bitte die Krankheits-ID auf einem Überweisungsschein. Bitte die Material-Angabe beachten.

  • Für privat versicherte Patienten empfehlen wir einen Antrag auf Kostenübernahme bei der Krankenversicherung.

  • Die Untersuchung wird auch für Selbstzahler angeboten.