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IllnessMentale Retardierung bei [ponto-]zerebellärer Hypoplasie, Differentialdiagnose

Summary

Short information

Comprehensive differential diagnostic panel for Intellectual deficit + (ponto-)cerebellar hypoplasia comprising 1 guideline-curated, another 15 core candidate and altogether 71 curated genes according to the clinical suspicion

ID
MP7899
Number of loci
Loci typeCount
Gen55
Accredited laboratory test
Examined sequence length
28,6 kb (Core-/Core-canditate-Genes)
134,5 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Test material
  • EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications

NGS +

 

Loci panel

Gen

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
AMPD22478NM_001368809.2AR
CASK2766NM_003688.3XL
CHMP1A591NM_002768.5AR
CLP11086NM_001142597.2AR
EXOSC3828NM_016042.4AR
OPHN12409NM_002547.3XLR
RARS21737NM_020320.5AR
SEPSECS1506NM_016955.4AR
SNX142841NM_153816.6AR
TBC1D232100NM_001199198.3AR
TSEN21398NM_025265.4AR
TSEN34933NM_024075.5AR
TSEN541581NM_207346.3AR
VLDLR2622NM_003383.5AR
VPS532499NM_001128159.3AR
VRK11191NM_003384.3AR
AFG3L22394NM_006796.3AD, AR
ATP8A23567NM_016529.6AR
ATXN23462NM_002973.4AD
ATXN72679NM_000333.4AD
CA8873NM_004056.6AR
CACNA1G6945NM_018896.5AD
CAMTA15022NM_015215.4AD
CRPPA1356NM_001101426.4AR
CWF19L11617NM_018294.6AR
DKC11545NM_001363.5XLR
EXOSC8831NM_181503.3AR
FKRP1488NM_024301.5AR
FKTN1386NM_001079802.2AR
GRID23024NM_001510.4AR
GRM13585NM_001278064.2AR
ITPR18088NM_002222.7AD, AR
KCNC32274NM_004977.3AD
LAMA19228NM_005559.4AR
LARGE12271NM_004737.7AR
MINPP1939NM_001178117.2AR
PAX61269NM_000280.5AD
PCYT21269NM_001184917.3AR
PITRM13205NM_001242309.1AR
PMM2741NM_000303.3AR
POMGNT11983NM_017739.4AR
POMT12244NM_007171.4AR
POMT22253NM_013382.7AR
PPIL1505NM_016059.5AR
RELN10383NM_005045.4AR
SLC25A461257NM_138773.4AR
SPTBN27173NM_006946.4AR
TOE11488NM_025077.4AR
TSEN15390NM_001127394.4AR
TUBA1A1356NM_006009.4AD
TUBA81350NM_018943.3AR
TUBB2B1338NM_178012.5AD
TUBB31353NM_006086.4AD
TUBB4A1335NM_006087.4AD
VPS512375
  • No OMIM-Gs linked
NM_013265.4AR

Informations about the disease

Clinical Comment

illness_ClinicalComment_MP7899

 

Synonyms
  • Alias: Intellectual disability
  • Alias: Psycho-motor retardation
  • Allelic: Amyotrophic lateral sclerosis, susceptibility to, 13 (ATXN2)
  • Allelic: Aniridia (PAX6)
  • Allelic: Anterior segment dysgenesis 5, multiple subtypes (PAX6)
  • Allelic: Cardiomyopathy, dilated, 1X (FKTN)
  • Allelic: Cataract with late-onset corneal dystrophy (PAX6)
  • Allelic: Coloboma of optic nerve (PAX6)
  • Allelic: Coloboma, ocular (PAX6)
  • Allelic: Dyskeratosis congenita, XL (DKC1)
  • Allelic: Dystonia 4, torsion, AD (TUBB4A)
  • Allelic: Epilepsy, familial temporal lobe, 7 (RELN)
  • Allelic: Fibrosis of extraocular muscles, congenital, 3A (TUBB3)
  • Allelic: Foveal hypoplasia 1 (PAX6)
  • Allelic: Hydrocephalus, congenital, 1 (CCDC88C)
  • Allelic: Keratitis (PAX6)
  • Allelic: Morning glory disc anomaly (PAX6)
  • Allelic: Muscular dystrophy-dystroglycanopathy (cong. without mental retardation), type B, 4 (FKTN)
  • Allelic: Muscular dystrophy-dystroglycanopathy (limb-girdle), type C, 1 (POMT1)
  • Allelic: Muscular dystrophy-dystroglycanopathy (limb-girdle), type C, 2 (POMT2)
  • Allelic: Muscular dystrophy-dystroglycanopathy (limb-girdle), type C, 3 (POMGNT1)
  • Allelic: Muscular dystrophy-dystroglycanopathy (limb-girdle), type C, 4 (FKTN)
  • Allelic: Muscular dystrophy-dystroglycanopathy (limb-girdle), type C, 5 (FKRP)
  • Allelic: Muscular dystrophy-dystroglycanopathy (limb-girdle), type C, 7 (CRPPA)
  • Allelic: Myoclonus, familial, 2 (SCN8A)
  • Allelic: Optic atrophy 12 (AFG3L2)
  • Allelic: Optic atrophy 9 (ACO2)
  • Allelic: Optic nerve hypoplasia (PAX6)
  • Allelic: Pancreatic agenesis 2 (PTF1A)
  • Allelic: Parkinson disease, late-onset, susceptibility to (ATXN2)
  • Allelic: Retinitis pigmentosa 76 (POMGNT1)
  • Allelic: Seizures, benign familial infantile, 5 (SCN8A)
  • Allelic: Thyroid carcinoma, follicular (MINPP1)
  • Aniridia, cerebellar ataxia + mental retardation [panelapp] (PAX6)
  • Cerebellar ataxia + mental retardation with/-out quadrupedal locomotion 3 (CA8)
  • Cerebellar ataxia, mental retardation + dysequilibrium syndrome 2 (WDR81)
  • Cerebellar ataxia, mental retardation + dysequilibrium syndrome 4 (ATP8A2)
  • Cerebellar ataxia, nonprogressive, with mental retardation (CAMTA1)
  • Cerebellar atrophy, visual impairment + psychomotor retardation (EMC1)
  • Cerebellar hypoplasia + mental retardation with/-out quadrupedal locomotion 1 (VLDLR)
  • Cerebellar, ocular, craniofacial + genital syndrome (MAB21L1)
  • Cerebellofaciodental syndrome (BRF1)
  • Cognitive impairment with/-out cerebellar ataxia (SCN8A)
  • Congenital disorder of glycosylation, type Ia (PMM2)
  • Cortical dysplasia, complex, with other brain malformations 1 (TUBB3)
  • Cortical dysplasia, complex, with other brain malformations 7 (TUBB2B)
  • Cortical dysplasia, complex, with other brain malformations 8 (TUBA8)
  • Developmental + epileptic encephalopathy 13 (SCN8A)
  • Developmental + epileptic encephalopathy 28(WWOX)
  • Developmental + epileptic encephalopathy 66 (PACS2)
  • Gillespie syndrome (ITPR1)
  • Hydrocephalus, congenital, 3, with brain anomalies (WDR81)
  • Hypomyelination + atrophy of basal ganglia + cerebellum [panelapp] (TUBB4A)
  • Infantile cerebellar-retinal degeneration (ACO2)
  • Intellectual developmental disorder with/-out epilepsy or cerebellar ataxia (RORA)
  • Intellectual disability [MONDO:0001071] (HEATR5B)
  • Leukodystrophy, hypomyelinating, 6 (TUBB4A)
  • Lissencephaly 2 [Norman-Roberts type] (RELN)
  • Lissencephaly 3 (TUBA1A)
  • Mega-corpus-callosum syndrome with cerebellar hypoplasia + cortical malformations (MAST1)
  • Mental retardation, XL, with cerebellar hypoplasia + distinctive facial appearance (OPHN1)
  • Microcephaly, progressive, seizures, cerebral + cerebellar atrophy (QARS)
  • Muscular dystrophy-dystroglycanopathy (cong. with brain + eye anomalies), type A, 1 (POMT1)
  • Muscular dystrophy-dystroglycanopathy (cong. with brain + eye anomalies), type A, 2 (POMT2)
  • Muscular dystrophy-dystroglycanopathy (cong. with brain + eye anomalies), type A, 3 (POMGNT1)
  • Muscular dystrophy-dystroglycanopathy (cong. with brain + eye anomalies), type A, 4 (FKTN)
  • Muscular dystrophy-dystroglycanopathy (cong. with brain + eye anomalies), type A, 5 (FKRP)
  • Muscular dystrophy-dystroglycanopathy (cong. with brain + eye anomalies), type A, 6 (LARGE1)
  • Muscular dystrophy-dystroglycanopathy (cong. with brain + eye anomalies), type A, 7 (CRPPA)
  • Muscular dystrophy-dystroglycanopathy (cong. with mental retardation), type B, 1 (POMT1)
  • Muscular dystrophy-dystroglycanopathy (cong. with mental retardation), type B, 2 (POMT2)
  • Muscular dystrophy-dystroglycanopathy (cong. with mental retardation), type B, 3 (POMGNT1)
  • Muscular dystrophy-dystroglycanopathy (cong. with mental retardation), type B, 6 (LARGE1)
  • Muscular dystrophy-dystroglycanopathy (cong. with/-out mental retard.), type B, 5 (FKRP)
  • Neurodevelopmental disorder with microcephaly, arthrogryposis + structural brain anomalies (SMPD4)
  • Pancreatic + cerebellar agenesis (PTF1A)
  • Pontocerebellar hypoplasia [MONDO:0020135] (HEATR5B)
  • Pontocerebellar hypoplasia [panelapp] (MINPP1)
  • Pontocerebellar hypoplasia type 1A (VRK1)
  • Pontocerebellar hypoplasia type 2A (TSEN54)
  • Pontocerebellar hypoplasia type 2B (TSEN2)
  • Pontocerebellar hypoplasia type 2C (TSEN34)
  • Pontocerebellar hypoplasia type 2D (SEPSECS)
  • Pontocerebellar hypoplasia type 4 (TSEN54)
  • Pontocerebellar hypoplasia type 5 (TSEN54)
  • Pontocerebellar hypoplasia, type 10 (CLP1)
  • Pontocerebellar hypoplasia, type 11 (TBC1D23)
  • Pontocerebellar hypoplasia, type 13 (VPS51)
  • Pontocerebellar hypoplasia, type 14 (PPIL1)
  • Pontocerebellar hypoplasia, type 1B (EXOC3)
  • Pontocerebellar hypoplasia, type 1C (EXOSC8)
  • Pontocerebellar hypoplasia, type 2E (VPS53)
  • Pontocerebellar hypoplasia, type 2F (TSEN15)
  • Pontocerebellar hypoplasia, type 7 (TOE1)
  • Pontocerebellar hypoplasia, type 8 (CHMP1A)
  • Pontocerebellar hypoplasia, type 9 (AMPD2)
  • Poretti-Boltshauser syndrome (LAMA1)
  • Spastic ataxia 5, AR (AFG3L2)
  • Spastic paraplegia 63 (AMPD2)
  • Spastic paraplegia 82, AR (PCYT2)
  • Spinocerebellar ataxia 13 (KCNC3)
  • Spinocerebellar ataxia 15 (ITPR1)
  • Spinocerebellar ataxia 2 (ATXN2)
  • Spinocerebellar ataxia 21 (TMEM240)
  • Spinocerebellar ataxia 28 (AFG3L2)
  • Spinocerebellar ataxia 29, congenital nonprogressive (ITPR1)
  • Spinocerebellar ataxia 40 (CCDC88C)
  • Spinocerebellar ataxia 42 (CACNA1G)
  • Spinocerebellar ataxia 42, early-onset, severe, with neurodevelopmental deficits (CACNA1G)
  • Spinocerebellar ataxia 44 (GRM1)
  • Spinocerebellar ataxia 5 (SPTBN2)
  • Spinocerebellar ataxia 7 (ATXN7)
  • Spinocerebellar ataxia, AR 12 (WWOX)
  • Spinocerebellar ataxia, AR 13 (GRM1)
  • Spinocerebellar ataxia, AR 14 (SPTBN2)
  • Spinocerebellar ataxia, AR 17 (CWF19L1)
  • Spinocerebellar ataxia, AR 18 (GRID2)
  • Spinocerebellar ataxia, AR 23 (TDP2)
  • Spinocerebellar ataxia, AR 30 (PIRM1)
Heredity, heredity patterns etc.
  • AD
  • AR
  • XL
  • XLR
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

No text defined