IllnessNeuropathy, CMT2/HMSNII, axonal; differential diagnosis
Summary
Comprehensive differential diagnostic panel for Neuropathy, hereditary motor-sensory, axonal; type II, comprising 58 guideline-curated, 8 core genes, 7 core candidate genes and altogether 59 curated genes
135,3 kb (Extended panel: incl. additional genes)
- EDTA-anticoagulated blood (3-5 ml)
NGS +
[[Sanger]]
Gene panel
Selected genes
Name | Exon Length (bp) | OMIM-G | Referenz-Seq. | Heredity |
---|---|---|---|---|
AARS1 | 2927 | NM_001605.3 | AR | |
BSCL2 | 1197 | NM_032667.6 | AD | |
GARS1 | 2220 | NM_002047.4 | AD | |
GDAP1 | 1077 | NM_018972.4 | AD, AR | |
GJB1 | 852 | NM_000166.6 | XL | |
HARS1 | 1530 | NM_002109.6 | AD | |
HSPB1 | 618 | NM_001540.5 | AD | |
KARS1 | 1940 | NM_001130089.2 | AR, AD | |
KIF1B | 5313 | NM_015074.3 | AD | |
MFN2 | 2274 | NM_014874.4 | AD | |
MPZ | 747 | NM_000530.8 | AD | |
NEFL | 1633 | NM_006158.5 | AD, AR | |
PMP22 | 483 | NM_000304.4 | AD | |
PNKP | 1566 | NM_007254.4 | AR | |
TRPV4 | 2616 | NM_021625.5 | AD | |
AIFM1 | 1842 | NM_004208.4 | XLR | |
ATP1A1 | 3072 | NM_000701.8 | AD | |
CHCHD10 | 429 | NM_213720.3 | AR | |
COX6A1 | 330 | NM_004373.4 | AR | |
DCAF8 | 1794 | NM_015726.4 | AD | |
DGAT2 | 1207 | NM_001253891.2 | AD | |
DHTKD1 | 2760 | NM_018706.7 | AD | |
DNAJB2 | 834 | NM_001039550.2 | AR | |
DNM2 | 2613 | NM_001005360.3 | AD | |
DRP2 | 2640 | NM_001171184.2 | XLR | |
DYNC1H1 | 13941 | NM_001376.5 | AD | |
GAN | 1794 | NM_022041.4 | AR | |
GNB4 | 1023 | NM_021629.4 | AD | |
HINT1 | 381 | NM_005340.7 | AR | |
HSPB8 | 591 | NM_014365.3 | AD | |
IGHMBP2 | 2982 | NM_002180.3 | AR | |
INF2 | 3750 | NM_022489.4 | AD | |
KIF5A | 3099 | NM_004984.4 | AD | |
LMNA | 1995 | NM_170707.4 | AR | |
LRSAM1 | 2172 | NM_138361.5 | AD, AR | |
MARS1 | 2703 | NM_004990.3 | AD | |
MCM3AP | 5943 | NM_003906.5 | AR | |
MME | 2253 | NM_007289.4 | AD, AR | |
MORC2 | 3140 | NM_014941.3 | AD | |
MPV17 | 531 | NM_002437.5 | AR | |
MTRFR | 501 | NM_152269.5 | AR | |
NAGLU | 2232 | NM_000263.4 | AD | |
NEFH | 3063 | NM_021076.4 | AD | |
PDK3 | 1248 | NM_001142386.3 | XL | |
PLEKHG5 | 3189 | NM_020631.6 | AR | |
PRPS1 | 957 | NM_002764.4 | XL | |
RAB7A | 624 | NM_004637.6 | AD | |
SACS | 13740 | NM_014363.6 | AR | |
SLC25A46 | 1257 | NM_138773.4 | AR | |
SORD | 1074 | NM_003104.6 | AR | |
SPG11 | 7332 | NM_025137.4 | AR | |
TFG | 1203 | NM_006070.6 | AD | |
TRIM2 | 2235 | NM_001130067.2 | AR | |
TTR | 444 | NM_000371.4 | AD | |
TUBB3 | 1353 | NM_006086.4 | AD | |
VCP | 2421 | NM_007126.5 | AD | |
YARS1 | 1587 | NM_003680.3 | AD |
Informations about the disease
Hereditary motor and sensory neuropathies (HMSN) or Charcot-Marie-Tooth (CMT) disorders and related neuropathies are a group of clinically and genetically heterogeneous conditions primarily affecting the peripheral nervous system with secondary muscle wasting and weakness. CMT is the most common inherited neuromuscular disorder, and patients with CMT and other HMSNs may present with many symptoms, with motor signs predominating over sensory symptoms in all age groups. Onset can occur in infancy, adolescence or throughout life with mild symptoms - even asymptomatic relatives can be detected in respective families. Motor nerve conduction velocities (NCV) distinguish two main types: CMT1 (demyelinating; NCV<35m/sec) and CMT2 (axonal; NCV>45m/sec). CMT neuropathy can be inherited either autosomal dominantly, recessively or X-linked (CMTX forms) and often occurs as a sporadic neuropathy. To date, over 60 different genetic loci have been associated with CMT1-4, CMTX and CMTdi (dominant intermediate type; NCV 35-45m/sec). Almost all of the relevant genes have been identified. These genes encode proteins involved in myelination, Schwann cell differentiation, axonal transport, endocytic recycling, mitochondrial function, protein translation, signal transduction, single-strand DNA break repair, and other processes. DNA diagnostic yields reported to date for all forms of CMT vary considerably from >20% to >60%, probably depending on the degree of clinical workup. Negative molecular genetic results by no means exclude clinical diagnosis.
Reference: https://www.ncbi.nlm.nih.gov/books/NBK1358/
- Alias: CMT2, Charcot-Marie-Tooth type 2
- Alias: HMSNII
- Alias: Polyneuropathie
- Allelic: Amyotrophic lateral sclerosis, susceptibility to (NEFH)
- Allelic: Arts syndrome (PRPS1)
- Allelic: Ataxia-oculomotor apraxia 4 (PNKP)
- Allelic: Combined oxidative phosphorylation deficiency 6 (AIFM1)
- Allelic: Combined oxidative phosphorylation deficiency 7 (MTRFR)
- Allelic: Cortical dysplasia, complex, with other brain malformations 1 (TUBB3)
- Allelic: Deafness, AR 89 (KARS1)
- Allelic: Deafness, XL 1 (PRPS1)
- Allelic: Deafness, XL 5 (AIFM1)
- Allelic: Epileptic encephalopathy, early infantile, 29 (AARS)
- Allelic: Fibrosis of extraocular muscles, congenital, 3A (TUBB3)
- Allelic: Frontotemporal dementia and/or amyotrophic lateral sclerosis 2 (CHCHD10)
- Allelic: Glomerulosclerosis, focal segmental, 5 (INF2)
- Allelic: Gout, PRPS-related (PRPS1)
- Allelic: Hypomagnesemia, seizures + mental retardation 2 (ATP1A1)
- Allelic: Microcephaly, seizures, developmental delay (PNKP)
- Allelic: Mitochondrial complex IV deficiency, nuclear type 2 (SCO2)
- Allelic: Myoclonus, intractable, neonatal (KIF5A)
- Allelic: Myopathy, isolated mitochondrial, AD (CHCHD10)
- Allelic: Myopia 6 (SCO2)
- Allelic: Pheochromocytoma (KIF1B)
- Allelic: Phosphoribosylpyrophosphate synthetase superactivity (PRPS1)
- Allelic: Pontocerebellar hypoplasia, type 1E (SLC25A46)
- Allelic: Spastic ataxia, Charlevoix-Saguenay type (SACS)
- Allelic: Spastic paraplegia 10, AD (KIF5A)
- Allelic: Spastic paraplegia 55, AR (MTRFR)
- Allelic: Spastic paraplegia 57, AR (TFG)
- Allelic: Spinal muscular atrophy, distal, AR, 4 (PLEKHG5)
- Allelic: Spondyloepimetaphyseal dysplasia, XL, with hypomyelinating leukodystrophy (AIFM1)
- Allelic: Usher syndrome type 3B (HARS1)
- Basel-Vanagait-Smirin-Yosef syndrome (MED25)
- Charcot-Marie-Tooth disease, DI C (YARS1)
- Charcot-Marie-Tooth disease, DI D (MPZ)
- Charcot-Marie-Tooth disease, DI E (INF2)
- Charcot-Marie-Tooth disease, DI F (GNB4)
- Charcot-Marie-Tooth disease, DI G (NEFL)
- Charcot-Marie-Tooth disease, RI C (PLEKHG5)
- Charcot-Marie-Tooth disease, RI D (COX6A)
- Charcot-Marie-Tooth disease, RI, A (GDAP1)
- Charcot-Marie-Tooth disease, RI, B (KARS1)
- Charcot-Marie-Tooth disease, XLD, 6 (PDK3)
- Charcot-Marie-Tooth disease, XLI [OMIM: CMTX1] (DRP2)
- Charcot-Marie-Tooth disease, XLR, 5 (PRPS1)
- Charcot-Marie-Tooth disease, axonal, type 2A2A (MFN2)
- Charcot-Marie-Tooth disease, axonal, type 2A2B (MFN2)
- Charcot-Marie-Tooth disease, axonal, type 2CC (NEFH)
- Charcot-Marie-Tooth disease, axonal, type 2DD (ATP1A1)
- Charcot-Marie-Tooth disease, axonal, type 2EE (MPV17)
- Charcot-Marie-Tooth disease, axonal, type 2F (HSPB1)
- Charcot-Marie-Tooth disease, axonal, type 2HH (JAG1)
- Charcot-Marie-Tooth disease, axonal, type 2K (GDAP1)
- Charcot-Marie-Tooth disease, axonal, type 2N (AARS)
- Charcot-Marie-Tooth disease, axonal, type 2W (HARS1)
- Charcot-Marie-Tooth disease, axonal, type 2Z (MORC2)
- Charcot-Marie-Tooth disease, axonal, with vocal cord paresis (GDAP1)
- Charcot-Marie-Tooth disease, type 1A (PMP22)
- Charcot-Marie-Tooth disease, type 1B (MPZ)
- Charcot-Marie-Tooth disease, type 1E (PMP22)
- Charcot-Marie-Tooth disease, type 1F (NEFL)
- Charcot-Marie-Tooth disease, type 2A1 (KIF1B)
- Charcot-Marie-Tooth disease, type 2A1 [OMIM] (DGAT2)
- Charcot-Marie-Tooth disease, type 2B2 (PNKP)
- Charcot-Marie-Tooth disease, type 2D (GARS1)
- Charcot-Marie-Tooth disease, type 2E (NEFL)
- Charcot-Marie-Tooth disease, type 2I (MPZ)
- Charcot-Marie-Tooth disease, type 2J (MPZ)
- Charcot-Marie-Tooth disease, type 4A (GDAP1)
- Charcot-Marie-Tooth neuropathy, XLD, 1 (GJB1)
- Cowchock syndrome (AIFM1)
- Dejerine-Sottas disease (MPZ, PMP22)
- Developmental delay, impaired growth, dysmorphic facies + axonal neuropathy (MORC2)
- Giant axonal neuropathy-1 (GAN)
- Giant axonal neuropathy-2, AD (DCAF8)
- Hereditary motor + sensory neuropathy VIA (MFN2)
- Hereditary motor + sensory neuropathy, type IIc (TRPV4)
- Hereditary motor and sensory neuropathy, Okinawa type (TFG)
- Hereditary neuropathies [panelapp] (KIF5A, TTR, TUBB3)
- Hereditary neuropathy [panelapp] (MTRFR)
- Hereditary neuropathy [panelapp] (SACS)
- Hereditary neuropathy [panelapp] (SCO2)
- Hypomyelinating neuropathy, congenital, 2 (MPZ)
- Infantile-onset multisystem neurologic, endocrine + pancreatic disease 2 (YARS1)
- Mitochondrial DNA depletion syndrome 6, hepatocerebral type (MPV17)
- Neuromyotonia and axonal neuropathy, AR (HINT1)
- Neuronopathy, distal hereditary motor, type IIB (HSPB1)
- Neuronopathy, distal hereditary motor, type VA (GARS1)
- Neuronopathy, distal hereditary motor, type VIII (TRPV4)
- Neuropathy, distal hereditary motor, type VA (BSCL2)
- Neuropathy, hereditary motor + sensory, type VIB (SLC25A46)
- Neuropathy, inflammatory demyelinating (PMP22)
- Neuropathy, recurrent, with pressure palsies (PMP22)
- Peripheral neuropathy, AR, with/-out impaired intellectual development (MCM3AP)
- Roussy-Levy syndrome (MPZ, PMP22)
- Sorbitol dehydrogenase deficiency with peripheral neuropathy (SORD)
- Spinal muscular atrophy, Jokela type (CHCHD10)
- Spinal muscular atrophy, distal, AR, 5 (DNAJB2)
- AD
- AR
- XL
- XLR
- Multiple OMIM-Ps
Bioinformatics and clinical interpretation
Test-Stärken
- DAkkS-akkreditiertes Labor
- EU-Richtlinie für IVD in Umsetzung
- Qualitäts-kontrolliert arbeitendes Personal
- Leistungsstarke Sequenzierungstechnologien, fortschrittliche Target-Anreicherungsmethoden und Präzisions-Bioinformatik-Pipelines sorgen für überragende analytische Leistung
- Sorgfältige Kuratierung klinisch relevanter und wissenschaftlich begründeter Gen-Panels
- eine Vielzahl nicht Protein-kodierender Varianten, die in unseren klinischen NGS-Tests mit erfasst werden
- unser strenges Variantenklassifizierungsschema nach ACMG-Kriterien
- unser systematischer klinischer Interpretations-Workflow mit proprietärer Software ermöglicht die genaue und nachvollziehbare Verarbeitung von NGS-Daten
- unsere umfassenden klinischen Aussagen
Testeinschränkungen
- Gene mit eingeschränkter Abdeckung werden gekennzeichnet
- Gene mit kompletten oder partiellen Duplikationen werden gekennzeichnet
- es wird angenommen, dass ein Gen suboptimal abgedeckt ist, wenn >90% der Nukleotide des Gens bei einem Mapping-Qualitätsfaktor von >20 (MQ>20) nicht abgedeckt sind
- die Sensitivität der Diagnostik zur Erkennung von Varianten mit genannten Testeinschränkungen ist möglicherweise begrenzt bei:
- Gen-Konversionen
- komplexe Inversionen
- Balancierte Translokationen
- Mitochondriale Varianten
- Repeat-Expansionen, sofern nicht anders dokumentiert
- nicht kodierende Varianten, die Krankheiten verursachen, die von diesem Panel nicht mit abgedeckt werden
- niedriger Mosaik-Status
- Repeat-Blöcke von Mononukleotiden
- Indels >50bp (Insertionen-Deletionen)
- Deletionen oder Duplikationen einzelner Exons
- Varianten innerhalb von Pseudogenen
- die analytische Sensitivität kann geringer ausfallen werden, wenn die DNA nicht von amedes genetics extrahiert wurde
Laboratory requirement
Die in grün gezeigten Gene sind kuratiert und werden als Gen-Panel untersucht. Eine Erweiterung des Panels (blau gezeigte Gene, jeweils ebenfalls kuratiert) kann auf Anfrage erfolgen. Sofern unter "Erweitertes Panel" ein Minuszeichen angezeigt wird, sind nur Core-/Basis-Gene verfügbar.
Für die Anforderung einer genetischen Untersuchung senden Sie uns bitte die Krankheits-ID auf einem Überweisungsschein. Bitte die Material-Angabe beachten.
Für privat versicherte Patienten empfehlen wir einen Antrag auf Kostenübernahme bei der Krankenversicherung.
Die Untersuchung wird auch für Selbstzahler angeboten.