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Interdisciplinary CompetenceMolecular Diagnostics
Know how in the analysis of genetic material.
For the benefit of patients.

IllnessNeutropenia, congenital; differential diagnosis

Summary

Short information

Comprehensive differential diagnostic panel for Neutropenia containing 10 guideline-curated genes and altogether >50 curated genes in the context of the suspected diagnosis

ID
NP9448
Number of genes
36 Accredited laboratory test
Examined sequence length
17,1 kb (Core-/Core-canditate-Genes)
71,3 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Test material
  • EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications

NGS +

 

Gene panel

Selected genes

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
CSF3R2511NM_000760.4AR
CXCR41059NM_003467.3AD
DNAJC212049NM_001012339.3AR
ELANE804NM_001972.4AD
G6PC31041NM_138387.4AR
GATA11242NM_002049.4XLR
GFI11269NM_005263.5AD
HAX1840NM_006118.4AR
RMRP300NR_003051.3AR
SRP541534NM_001146282.2AD
TCN21284NM_000355.4AR
VPS451617NM_007259.5AR
WAS1509NM_000377.3XLR
ACD1647NM_001082486.2AD, AR
ACKR11017NM_001122951.3AR
AK2675NM_001199199.3AR
CTC13654NM_025099.6AR
DKC11545NM_001363.5XLR
EFL13382NM_001040610.3AR
G6PC11074NM_000151.4AR
LYST11406NM_000081.4AR
MLPH1719NM_001042467.3AR
MYO5A5568NM_000259.3AR
NHP2273NM_001034833.2AR
NOP10195NM_018648.4AR
PARN1920NM_002582.4AD, AR
RAB27A666NM_004580.5AR
RTEL13732NM_032957.5AD, AR
SAMD9L4756NM_152703.5AD
SLC37A41291NM_001164277.2AD
STN11221NM_024928.5AR
TAFAZZIN879NM_000116.5XLR
TERT3399NM_198253.3AR, AD
TINF21356NM_001099274.3AD
TP531182NM_000546.6AD
WRAP531647NM_001143990.2AR

Informations about the disease

Clinical Comment

Severe congenital neutropenia renders affected individuals susceptible to recurrent infections. Neutropenia can occur in the perinatal period or lateron. The recurrent infections begin in infancy and include sinusitis, pulmonary and hepatic affections, which may be accompanied by fever, gingivitis and skin inflammation. Nearly half of these patients have osteopenia and may develop osteoporosis. Bone involvement may begin in infancy or as late as adulthood. Approximately 20% of these patients develop certain blood malignancies in adolescence, particularly myelodysplastic syndrome or leukemia. A few affected individuals have additional health problems such as seizures, developmental delays or cardiac and genital abnormalities. Congenital neutropenia can be caused by mutations in many different genes. These genes play a role in the maturation and function of neutrophils, which secrete e.g. immune molecules. The life span of neutrophils is shortened, and their function is impaired or the physiological maturation is impaired. About half of all cases of severe congenital neutropenia are caused by mutations in the ELANE gene, another 10% by mutations in the HAX1 gene. Mutations in other genes are each responsible for only a small percentage of all cases. In about one third of these patients, the cause remains unknown. Most cases of severe congenital neutropenia are classified as sporadic. When congenital neutropenia is caused by mutations in the ELANE gene, it is inherited in an autosomal dominant manner (as it is for mutations in other genes). If the disease is caused by alterations in the HAX1 gene, it is inherited in an autosomal recessive manner (like in other cases). Less commonly, severe congenital neutropenia is inherited in an X-linked recessive manner. A negative molecular genetic result by no means excludes the clinical diagnosis.

References: https://www.ncbi.nlm.nih.gov/books/NBK1533/

https://www.ncbi.nlm.nih.gov/books/NBK571103/

https://www.ncbi.nlm.nih.gov/books/NBK1756/

https://www.ncbi.nlm.nih.gov/books/NBK285321/

https://www.ncbi.nlm.nih.gov/books/NBK247162/

 

Synonyms
  • Allelic: 3-methylglutaconic aciduria, type VIIB, AR (CLPB)
  • Allelic: Aplastic anemia, susceptibility to (SBDS)
  • Allelic: Blood group, Duffy system (AKCR1)
  • Allelic: Cartilage-hair hypoplasia (RMRP)
  • Allelic: Leukemia, acute myeloid (TERT)
  • Allelic: Malaria, vivax, protection against (AKCR1)
  • Allelic: Melanoma, cutaneous malignant, 9 (TERT)
  • Allelic: Metaphyseal dysplasia without hypotrichosis (RMRP)
  • Allelic: Pulmonary fibrosis and/or bone marrow failure, telomere-related, 1 (TERT)
  • Allelic: Pulmonary fibrosis and/or bone marrow failure, telomere-related, 3 (RTEL1)
  • Allelic: Pulmonary fibrosis and/or bone marrow failure, telomere-related, 4 (PARN)
  • Allelic: Revesz syndrome (TINF2)
  • Allelic: Thrombocytopenia with beta-thalassemia, XL (GATA1)
  • Allelic: Thrombocytopenia, XL (WAS)
  • Allelic: Thrombocytopenia, XL, intermittent (WAS)
  • Allelic: Thrombocytopenia, XL, with/-out dyserythropoietic anemia (GATA1)
  • Allelic: Wiskott-Aldrich syndrome (WAS)
  • Anauxetic dysplasia 1 (RMRP)
  • Anemia, XL, with/-out neutropenia +/- platelet abnormalities (GATA1)
  • Ataxia-pancytopenia syndrome (SAMD9L)
  • BM failure syndrome, AR [panelapp] (NAF1)
  • Barth syndrome [3-methylglutaconic aciduria type II] (TAFAZZIN)
  • Bone marrow failure syndrome 3 (DNAJC21)
  • Bone marrow failure syndrome 5 (TP53)
  • Cerebroretinal microangiopathy with calcifications + cysts (CTC1)
  • Cerebroretinal microangiopathy with calcifications + cysts 2 (STN1)
  • Chediak-Higashi syndrome (LYST)
  • Cohen syndrome (VPS13B)
  • Congenital disorder of glycosylation, type IIw (SLC37A4)
  • Dursun syndrome (G6PC3)
  • Dyskeratosis congenita [panelapp] (NAF1)
  • Dyskeratosis congenita, AD (TINF2)
  • Dyskeratosis congenita, AD 2 (TERT)
  • Dyskeratosis congenita, AD 4 (RTEL1)
  • Dyskeratosis congenita, AD 6 (ACD)
  • Dyskeratosis congenita, AR 1 (NOP10)
  • Dyskeratosis congenita, AR 2 (NHP2)
  • Dyskeratosis congenita, AR 3 (WRAP53)
  • Dyskeratosis congenita, AR 4 (TERT)
  • Dyskeratosis congenita, AR 5 (RTEL1)
  • Dyskeratosis congenita, AR 6 (PARN)
  • Dyskeratosis congenita, AR 7 (ACD)
  • Dyskeratosis congenita, XL (DKC1)
  • Emberger syndrome (GATA2)
  • Glycogen storage disease Ia (G6PC1)
  • Glycogen storage disease Ib (SLC37A4)
  • Glycogen storage disease Ic (SLC37A4)
  • Griscelli syndrome, type 1 (MYO5A)
  • Griscelli syndrome, type 2 (RAB27A)
  • Griscelli syndrome, type 3 (MLPH)
  • Hermansky-Pudlak syndrome 2 (AP3B1)
  • Immunodeficiency 21 (GATA2)
  • Immunodeficiency due to defect in MAPBP-interacting protein (LAMTOR2)
  • Immunodeficiency, XL, with hyper-IgM (CD40LG)
  • MIRAGE s.: Myelodysplasia, Infection, Restric. growth, Adrenal hypopl., Genital-/Enteropathy (SAMD9)
  • Monosomy 7 myelodysplasia + leukemia syndrome 1 (SAMD9L)
  • Monosomy 7 myelodysplasia + leukemia syndrome 2 (SAMD9)
  • Myelokathexis, isolated (CXCR4)
  • Neutropenia, alloimmune neonatal [panelapp] (FCGR3B)
  • Neutropenia, cyclic (ELANE)
  • Neutropenia, nonimmune chronic idiopathic, of adults (GFI1)
  • Neutropenia, severe congenital 1, AD (ELANE)
  • Neutropenia, severe congenital 2, AD (GFI1)
  • Neutropenia, severe congenital 3, AR (HAX1)
  • Neutropenia, severe congenital 4, AR (G6PC3)
  • Neutropenia, severe congenital 5, AR (VPS45)
  • Neutropenia, severe congenital 6, AR (JAGN1)
  • Neutropenia, severe congenital 7, AR (CSF3R)
  • Neutropenia, severe congenital 8, AD (SRP54)
  • Neutropenia, severe congenital 9, AD (CLPB)
  • Neutropenia, severe congenital XL (WAS)
  • Osteopetrosis, AR 1 (TCIRG1)
  • Osteopetrosis, infantile malignant (TCIRG1)
  • Poikiloderma with neutropenia (USB1)
  • Pyogenic sterile arthritis, pyoderma gangrenosum, acne (PSTPIP1)
  • Reticular dysgenesis (AK2)
  • Shwachman-Diamond syndrome (SBDS)
  • Shwachman-Diamond syndrome 2 (EFL1)
  • T-cell immunodeficiency, recurrent infections, autoimmunity, cardiac malformations (STK4)
  • Transcobalamin II deficiency (TCN2)
  • WHIM [Warts, Hypogammaglobulinemia, Infections, Myelokathexis] syndrome 1 (CXCR4)
  • White blood cell count QTL (AKCR1)
Heredity, heredity patterns etc.
  • AD
  • AR
  • XLR
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

No text defined